Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03468 ATGCAGAATGGAAAGTTCGTCCTGCCCTTTGGGTGCTTGCTAGCTTTGGATGAGAAGACATTTAGGGTCATTGCATACAGTCAGAATGCATCTGAAATGCTTACCATGGTTAGCCATGCTGTCCCAGGTGTTGGTGATCACCCTGCTCTTGCCATTAGCACCGACATTCGGACTATTTTCACGGCCTCGAGTGCTGTTGCTTTGCAAAAGGCCCTTGCAGTTCTGAAGGTTTCCCTTCTTAACCCCATTTTAGTTCATTGCAAGACTTCTGGGAAACCCTATGCAATTGTTCATCGTGTTACCGATAGTTTGATCATTGATTTTGAGCCTGTTAAGCCTCATGAAGTTTCCATGACTCGGCCAGAGTGCCCAATCTTACAAGCTTGCAGCAAAAGTAATAACTAG 405 0.4543 MQNGKFVLPFGCLLALDEKTFRVIAYSQNASEMLTMVSHAVPGVGDHPALAISTDIRTIFTASSAVALQKALAVLKVSLLNPILVHCKTSGKPYAIVHRVTDSLIIDFEPVKPHEVSMTRPECPILQACSKSNN 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03468 134 PANTHER PHYTOCHROME A 1 119 - -
Aip03g03468 134 Pfam PAS fold 1 111 IPR013654 GO:0006355
Aip03g03468 134 Gene3D PAS domain 5 132 - -
Aip03g03468 134 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 119 - -
Aip03g03468 134 SUPERFAMILY PYP-like sensor domain (PAS domain) 4 113 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03468 Aip-Chr3 113404490 113404894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03468 1 119 Histidine Kinase Gene Family AT1G09570 75.000 6.00e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03468 K12120 - csin:114255811 186.037