Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03457 ATGCCGGCGTGGTGGAGTAGAAAATCCTGCAAGAACAAACAGCAGAATCAGGGTGAGGTTGAAGATGAGGAAGAGACACGTGGCAGGCAGAAATTCAATCTGATAGGATCGCCGATTAGCATTATCAGCAGCAGGAAGAAAGGCAAGGACAAGAACAAGAACAACAAGAGCTTCGATGAGCTTATCGCCTCTCGCAACTCACCGAGGACAAGCAAGGAATTCGCCAGCGTCGACGGTAACGACAATAACAGAGACCGAGACAGAGGGCTTCCGTTGCCTCGCCCTACGGTTTCGGCCAATCACAGCTTCAACAACGATCAGGGCCTCGTCTTCGGATCTACTTCGCTATCTGGTTCCAGCGTCAGCTCCTCAACCTCTAACGATGACCACCCTATATCTCCTCAATTCATTAACAACAGAGGACAAGGTGACATCAAATTCCATGTGAGGCCAAAGAGTCCAGGTGCTGGGTCAAGGGGGCCGACAAGCCCTACATCGCCACTTCATCAGAGGATTTTGAGTCTCGACTCTCCTACAGGCAAGCAAGAGGATGGAAAAAGTGAATGTCACCCGTTGCCTCTTCCCCCCGGCTCTCCTACTAGTCCTTCCACCCTTTCCACCCCACGGGCAAATGGATCCTTAGAAAACAACGCCAGTAATCTGTCGAAGTGGAAGAAAGGAAAGCTTCTAGGAAGGGGAACTTTTGGGCATGTTTATCTTGGATTTAATAGTGAGAGTGGACAAATGTGTGCAATAAAGGAAGTCAGGGTTGTCTCTGATGATCCAACATCAAAAGAGTGCCTCAGACAACTTAATCAGGAGATAAACTTGCTTAATCAGCTTTCACATCCAAACATTGTTCAATATTATGGGAGTGAACTGGGTGAAGAAACACTTTCAGTTTATTTGGAATATGTTTCTGGTGGTTCTATCCATAAATTGCTACAGGAATATGGTTCATTTAAGGAGCCTGTCATTCAAAATTATACCAGGCAGATTGTATCTGGGCTTGCTTATTTGCATGCAAGAAATACAGTACACAGAGATATCAAAGGAGCTAACATACTTGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACTAATAAATTCTGCTGCCTCAGTACTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACCAATGGCTATGGTCTTCCAGTTGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCGAAGCCTCCATGGAATCAATATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATCCCTGAACATCTTTCAGATGATGCCAAAAGCTTCATTAAGCTATGTTTAAATAGGGACCCGTTAGCACGCCCAACAGCTCAAATGCTACTAGACCATCCCTTCATTCGTGACCAATCAGCAACAAAAGCTGTAAATGTTAGCATAACCAGAGATGCTTTCCCCCGCATGTTAGATGGAAGCCGGACTCCGCCACCTGTTTTGGAGCATCAATCCAATAGAACAAGTATAACGTCACTTGATGGAGATCATGCAACAAAGACAGCTCGAGCAGCTTCTCACGCATTAAGGAGCCCAAGGTAA 1635 0.452 MPAWWSRKSCKNKQQNQGEVEDEEETRGRQKFNLIGSPISIISSRKKGKDKNKNNKSFDELIASRNSPRTSKEFASVDGNDNNRDRDRGLPLPRPTVSANHSFNNDQGLVFGSTSLSGSSVSSSTSNDDHPISPQFINNRGQGDIKFHVRPKSPGAGSRGPTSPTSPLHQRILSLDSPTGKQEDGKSECHPLPLPPGSPTSPSTLSTPRANGSLENNASNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVVSDDPTSKECLRQLNQEINLLNQLSHPNIVQYYGSELGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRQIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKLINSAASVLSFKGSPYWMAPEVVMNTNGYGLPVDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSDDAKSFIKLCLNRDPLARPTAQMLLDHPFIRDQSATKAVNVSITRDAFPRMLDGSRTPPPVLEHQSNRTSITSLDGDHATKTARAASHALRSPR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03457 544 MobiDBLite consensus disorder prediction 500 544 - -
Aip03g03457 544 MobiDBLite consensus disorder prediction 59 77 - -
Aip03g03457 544 ProSiteProfiles Protein kinase domain profile. 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03457 544 MobiDBLite consensus disorder prediction 14 30 - -
Aip03g03457 544 MobiDBLite consensus disorder prediction 1 218 - -
Aip03g03457 544 Gene3D Transferase(Phosphotransferase) domain 1 221 502 - -
Aip03g03457 544 SMART serkin_6 224 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03457 544 SUPERFAMILY Protein kinase-like (PK-like) 208 512 IPR011009 -
Aip03g03457 544 MobiDBLite consensus disorder prediction 158 177 - -
Aip03g03457 544 PANTHER MAP KINASE KINASE KINASE 1 544 - -
Aip03g03457 544 ProSitePatterns Protein kinases ATP-binding region signature. 230 253 IPR017441 GO:0005524
Aip03g03457 544 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 544 - -
Aip03g03457 544 Pfam Protein kinase domain 225 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03457 544 MobiDBLite consensus disorder prediction 510 527 - -
Aip03g03457 544 MobiDBLite consensus disorder prediction 203 218 - -
Aip03g03457 544 MobiDBLite consensus disorder prediction 44 58 - -
Aip03g03457 544 CDD STKc_MEKK1_plant 223 480 - -
Aip03g03457 544 MobiDBLite consensus disorder prediction 97 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03457 Aip-Chr3 112985090 112989117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03457 1 544 MAP Kinase Kinase Kinase AT1G53570 57.754 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip03g03457 Pkinase 1.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03457 K04421 - gmx:100813122 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03457 03 112985090 112989117 Aip03g03457 03 112985090 112989117 ECH
Aip03g03457 03 112985090 112989117 Aip10g02360 10 106967395 106971661 PCT