Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03420 ATGGGCAAAGAAAATGGGTCAGCAACGCCAAAGGAAGAAGGCAGTGATGACGGTTACTCAAGTCTTGAGACTGTTGAATTAGAATCTCAGTCACGACCTAGCCTAGAGAAGGACACAGGTTTGCCAAGTTGTCGCGTGTGCCAATGTGCCGAATCTGATAAAAGGGGAGATGCTGCCCTAGAATTTTTGGGCATCACTCCGGTGATCAAAGCTTGTAAATGGAATGGGGAAGATGGGGAGGTAAGGTCAGAAGGCCAGGGAATTCAGAAAAATATGTCTTTTAACAAAAATGTTGGAAGCAAATCTGGGATGGTGGAATTTGTAGGCCCTAATGGGGAGGTTTTCATGTGTAGAAGTGATGTGGAGATTGGTTTGTCTCACCAAGATGCATTGATTGAACTTGGTTGCTGTTGTAAGAATGACCTTGCTTTAGTACACTATGCTTGTGCACTCAAGTGGTTTATTAATCATGGATCAACAATTTGTGAAATATGTGGACACATAGCCAATAATATCAGAATCTCTGACTTTAACAAGGTTGTTGGTTCTCTGAAGGAATATGAAGCCTTGAGGGAGAGAACTGTCAGTGGGGATCCTGGTCCTCATGTCCATGCGAATAATAATACTGGCGTTGATCCTGACGCTGTGGCTGCTATCCGGAGGCAACGGCTAAGTGAGATTGCATTATGGTTTTGTCCTCATAATACCAGTAGTATAAACAACAATAGCAATGCCGACACAGTTTCACAGGTTGCTTCTGAGCAGCCTTCAAATTTTGTTACTGAAGATGCTGGCCCTGCACAGAGTCCTGCAACCAAGTGGGCCGTGGAAGGCACAGGGATCCTGCTTGCTACTGGCCTGCTTACAATCACCCTTGCGTGGCTGATAGCTCCTCGAGTTGGAAAGAAAACAGCCAAAAGTGGTCTTCACATCCTACTTGGAGGTGTTTGTGCTTTAACAGTGGTTGTTTTTTTCCGCTTTTTTGTGCTTACCAGAATCAAGTACGGACCTGCACGTTATTGGGCAATCTTATTCGTTTTCTGGTTTCTTGTGTTTGCCATATGGGCTTCACGGACACATGAACTCACTCCACTTGTACATTTTTATGTAGCTCTTTCTCCTTCTCCCTCTCCTACCATGAAAAGCCTCTTCCTTGTATCGTTCCTTGCACCAAGTGCCCCAGTTGGAAGCAGACCCTTCTCTCAACATTTAACCACCAAGTGCTTTGGCAAGCAACTTCACTTCCACTCTCGATGTGTTCTTTTCTCTTCATACACATGTTCTGCAACGCTATCTGTTGTGCCGGACCTACAAGAAAAGGAAACATTTGATGGAGAGAAGGCTTCTTTGCTTCTCAAAGATCTCAGAAAGACCTTTAATTCGGGGAAGACAAAGAGCTATGAGTGGCGAATTTCACAGTTGGAAGGCATAGCCAAGATGCTAGAAGAGAAGGAGAAGGAAATTCTTGATGCTCTTAATAAAGACCTTTCTAAACCAGGATTGGAAGGATATATATCTGAGGTTTCCCAGGCAAAATCATCATGTAGTGAAGCACTTCAAGAACTGAAACACTGGATGAAGCCGGAAAAGGTCAAAACTTCATTCACCACATTACCATCATCAGCAGAGATTGTGTCAGAACCATTGGGAGCTGTGTTGGTCATCTCCACATGGAACTTCCCTTTCTTGTTATCAATGGATCCTGTCATTGGAGCCATATCAGCGGGTAACGCAGTGGTCTTGAAACCATCAGAAATTGCTCCGGCAACTTCATCACTACTTGCAAATTTGATTGAAGGTTATCTAGATAACTCTGCAATAAGAGTAGTTGAAGGGGCTATTCCTGAAACAACTGCACTCTTGGAACAGAAGTGGGATAAGATACTTTACACAGGTAGTGCTAGGGTCGGTCGCATTGTCATGGCTGCTGCTGCAAAGCACCTTACACCTGTGATTCTGGAACTCGGCGGAAAGTGTCCAGCTGTTGTTGATTCAGATGTCAATCTACAAGTTACTGCTAGGAGGATAATAGGTGGAAAGTGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAAAGAATTTGCTCCAAAACTGATAAATGCTTTGAAAGAAGAGTTGAAGCAATTCTTTGGCGAAGATCTGATGGAATCAAAAGACATGTCTCGTATTGTGTCCCCGACCCAGTTTTCGCGGCTGGTGAAGCTCTTGGATGAAGATAAAGTATCTGACAAAATTGTTTTTGGAGGTCAGAGGGATGAGATGAAACTAAAGATTGCACCAACTATCATATTGGATGTTCCAGATGATGCAATGGTGATGCAAGAAGAGATATTTGGGCCAATAATGCCAATCATCACTGTAGAAAACATAGAAGATAGCTTTGGCATAATCAAATCTAAGCCAAAACCTCTTGCTGCTTATCTCTTTACAAACAATGAGCAGTTAAAGAAGGCATATGTGGAAAATATATCTTCTGGAGGGATGCTCATCAATGACACTGTCATACATGTAGTTGCGACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAAAGTGGAATGGGATGTTACCACGGGAAGTTCTCTTTTGATAGTTTCAGCCATAAGAAGTCTGTCCTCTATAGAAGTTTTGATGCAGATTCATCCTTAAGGTTCCCTCCATATACACCCGAGAAGGAAAAATTGTTGAAGGCCATTTTCAGTGGCAACATTATTCGCATAATTCTTACTTTGCTTGGATGGTCTTAG 2766 0.4295 MGKENGSATPKEEGSDDGYSSLETVELESQSRPSLEKDTGLPSCRVCQCAESDKRGDAALEFLGITPVIKACKWNGEDGEVRSEGQGIQKNMSFNKNVGSKSGMVEFVGPNGEVFMCRSDVEIGLSHQDALIELGCCCKNDLALVHYACALKWFINHGSTICEICGHIANNIRISDFNKVVGSLKEYEALRERTVSGDPGPHVHANNNTGVDPDAVAAIRRQRLSEIALWFCPHNTSSINNNSNADTVSQVASEQPSNFVTEDAGPAQSPATKWAVEGTGILLATGLLTITLAWLIAPRVGKKTAKSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFAIWASRTHELTPLVHFYVALSPSPSPTMKSLFLVSFLAPSAPVGSRPFSQHLTTKCFGKQLHFHSRCVLFSSYTCSATLSVVPDLQEKETFDGEKASLLLKDLRKTFNSGKTKSYEWRISQLEGIAKMLEEKEKEILDALNKDLSKPGLEGYISEVSQAKSSCSEALQELKHWMKPEKVKTSFTTLPSSAEIVSEPLGAVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEIAPATSSLLANLIEGYLDNSAIRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSDVNLQVTARRIIGGKWACNSGQACISVDYIITRKEFAPKLINALKEELKQFFGEDLMESKDMSRIVSPTQFSRLVKLLDEDKVSDKIVFGGQRDEMKLKIAPTIILDVPDDAMVMQEEIFGPIMPIITVENIEDSFGIIKSKPKPLAAYLFTNNEQLKKAYVENISSGGMLINDTVIHVVATRGLPFGGVEESGMGCYHGKFSFDSFSHKKSVLYRSFDADSSLRFPPYTPEKEKLLKAIFSGNIIRIILTLLGWS 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03420 921 MobiDBLite consensus disorder prediction 22 37 - -
Aip03g03420 921 PANTHER ALDEHYDE DEHYDROGENASE 420 921 IPR012394 GO:0006081
Aip03g03420 921 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 456 876 IPR016162 GO:0016491
Aip03g03420 921 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 175 IPR013083 -
Aip03g03420 921 SMART ringv_2 117 166 IPR011016 GO:0008270
Aip03g03420 921 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 420 921 - -
Aip03g03420 921 Pfam Aldehyde dehydrogenase family 454 878 IPR015590 GO:0016491
Aip03g03420 921 SUPERFAMILY ALDH-like 452 893 IPR016161 GO:0016491
Aip03g03420 921 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 657 858 IPR016163 GO:0016620
Aip03g03420 921 ProSiteProfiles Zinc finger RING-CH-type profile. 106 172 IPR011016 GO:0008270
Aip03g03420 921 MobiDBLite consensus disorder prediction 1 41 - -
Aip03g03420 921 SUPERFAMILY RING/U-box 128 168 - -
Aip03g03420 921 Coils Coil 474 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03420 Aip-Chr3 111991595 111997945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03420 425 921 Aldehyde Dehydrogenase Gene Family AT4G34240 66.801 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03420 K00128 - gmx:100800699 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03420 03 111991595 111997945 Aip03g03420 03 111991595 111997945 ECH