Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03406 ATGCAACAAGAAGAAGAAGAGAAGAAGATGAAGGTGAAGAAGGGATGGGTGACAGTTCAAGTGGGTTGGGAGGAAGAAGAAGAAGAAGAAGAACGAGAATTGGAGAGATTCAACATCCCCATATGGTACCTCTATCATCCTCTTCTTGAGGGCCTTCTTCAAAGAGCATACGACGTTTATGGCTACCACACCCACGGCCCCCTCAAGCTCCCTTGTTCCGTCGATGACTTCCTTCATCTCCGCTGGCGAATCCACAAGGAGTCCCTTCCTCTCCACCATCATTTCCTTCACTCTTGCTAG 300 0.4867 MQQEEEEKKMKVKKGWVTVQVGWEEEEEEEERELERFNIPIWYLYHPLLEGLLQRAYDVYGYHTHGPLKLPCSVDDFLHLRWRIHKESLPLHHHFLHSC 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03406 99 PANTHER OS02G0769100 PROTEIN 5 92 - -
Aip03g03406 99 Pfam Auxin responsive protein 6 83 IPR003676 GO:0009733
Aip03g03406 99 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03406 Aip-Chr3 111645663 111646198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03406 12 80 Calmodulin-binding Proteins AT3G43120 39.130 6.61e-09 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03406 - K14488 jre:108981711 123.25