Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03405 ATGTTTCACACAAAATTTATCCGGGATCCTCTGACAATGTTGACAAGTTGGCTCATATTCCTTAGTGTCTTGAAACTCACCTATGCAGTGAAGGAAGCTGATATAGAAGGTGAAGCGCTGCTTGATCTTTTGAAGAATCTGAATGATTCCAATAATGGAATACAAGACTGGAACAGTTATATGGTGAGCCCGTGTTTCAGTTGGTCTCATGTCACTTGTAGAAACGGACATGTTGTATCTCTGGCCCTGGATTCAATTGGATTCTCTGGAACACTTTCTCCCTCAATTCTCAAATTGAAATATCTGGTTACCTTGGAATTGCAGAACAACAAACTTTCAGGCCCCTTGCCTGATTACATTGCCAACTTGACAACCCTGCAATATCTGAATCTTGCTGGCAATAACTTCATTGGCTCTGTACCAGCTTCATGGGCTCAACTTTCCACTCTCAAACATTTGGATCTTTCATCAAATCGTCTCACTGGAACTATCCCATTGCAACTCTTTTCAATTCCAGTGTTCAATTTTTCAAATACACAGCTTTATTGTGGTTCTAAGTTGGAGCAGCCATGTGATTCTAAATCCGACCGTCCAGCTTCAAAGAAGAAACCAAAACTTGCACAGGCAGTACAGTTTGCAAGTTGCGGTGCATTTGCACTTGTGTGTCTTGGGGCAATCTGCACATACAGATACCATCAAATGCACAAACAAAAAAGTGATGTCTTTGTTGATGTTTCAGGTGAGGATGAAAGCAAGATATCTTTTGGACAACTGAAAAGATTTTCATGGCGAGAACTCCAAGTTGCTACAAAAAGCTTCAGTGAAAGCAATGTAATAGGGCAGGGAGGATTTGGAAAAGTGTACAAAGGTATACTGTTGGATAATACCAAAATCGCCGTGAAACGCCTCACTGATTATCATAATCCCGGCGGAGAGGCCGCATTCGAGAGAGAAGTTCATCTTATAAGCGTTGCAGTTCATAGAAACCTCCTCAGACTAATTGGATTCTGTACAACCTCAACTGAGAGAATCCTAGTATACCCTTTCATGGAGAATCTAAGTGTAGCATATAGACTAAGAGATTTGAAAGCAGATGAGAAAGGTTTGGATTGGGGTGCAAGAAAGCGAGTGGCTTTTGGTACAGCACATGGTTTGGAGTATCTGCACGAACAATGCAACCCCAAGATAATACATCGCGATCTGAAGGCAGCAAACATCCTACTAGATGATGAGTTTGAAGCAGTACTTGGTGATTTCGGGCTAGCCAAGCTTGTTGACACAAGAATGACCCATGTTACCACTCAAGTCCGCGGCACAATGGGTCATATAGCCCCTGAATACTTGTCCACTGGAAAATCATCCGAAAAGACTGATGTCTTTGGATATGGCATCACACTTCTTGAACTAGTCACCGGCCAGCGCGCAGTAGACCTCTCTAGGCTTGAAGAAGAAGAGGATGTTCTTCTAATTGATCATGTTAAGAAGCTTCTGAAGGAGAACAGGTTGGAGGACATAGTGGATAGAAACTTGGAGAGTTATGATCCGAAAGAAGTGGAGAGAATTCTTCAGGTTGCATTGTTGTGCACACAATGCTACCCTGAGGATCGACCAATCATGTCTGAGGTTGTGAAAATGCTGCAGGGAGTGGGGTTAGCTGATAGATGGGCAGATTGGAAGCAAGTTGAAGATGCAAGGACTCATGAACAATTCTCACAAACCACTCATCAATTTCCTTGGAGTGATGAATCCACCCATGAACAAGAGGCAATTCAGCTTTCCAGGGCAAGATAA 1791 0.4266 MFHTKFIRDPLTMLTSWLIFLSVLKLTYAVKEADIEGEALLDLLKNLNDSNNGIQDWNSYMVSPCFSWSHVTCRNGHVVSLALDSIGFSGTLSPSILKLKYLVTLELQNNKLSGPLPDYIANLTTLQYLNLAGNNFIGSVPASWAQLSTLKHLDLSSNRLTGTIPLQLFSIPVFNFSNTQLYCGSKLEQPCDSKSDRPASKKKPKLAQAVQFASCGAFALVCLGAICTYRYHQMHKQKSDVFVDVSGEDESKISFGQLKRFSWRELQVATKSFSESNVIGQGGFGKVYKGILLDNTKIAVKRLTDYHNPGGEAAFEREVHLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKADEKGLDWGARKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDTRMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAVDLSRLEEEEDVLLIDHVKKLLKENRLEDIVDRNLESYDPKEVERILQVALLCTQCYPEDRPIMSEVVKMLQGVGLADRWADWKQVEDARTHEQFSQTTHQFPWSDESTHEQEAIQLSRAR 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03405 596 Pfam Leucine Rich repeat 123 139 IPR001611 GO:0005515
Aip03g03405 596 Pfam Leucine Rich repeat 147 162 IPR001611 GO:0005515
Aip03g03405 596 SMART serkin_6 273 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03405 596 Gene3D Phosphorylase Kinase; domain 1 242 349 - -
Aip03g03405 596 SUPERFAMILY Protein kinase-like (PK-like) 251 547 IPR011009 -
Aip03g03405 596 Gene3D Ribonuclease Inhibitor 33 193 IPR032675 -
Aip03g03405 596 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 596 - -
Aip03g03405 596 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Aip03g03405 596 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Aip03g03405 596 PANTHER LRR RECEPTOR-LIKE KINASE 13 596 - -
Aip03g03405 596 Gene3D Transferase(Phosphotransferase) domain 1 350 566 - -
Aip03g03405 596 MobiDBLite consensus disorder prediction 570 596 - -
Aip03g03405 596 MobiDBLite consensus disorder prediction 570 586 - -
Aip03g03405 596 ProSiteProfiles Protein kinase domain profile. 273 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03405 596 SUPERFAMILY L domain-like 38 181 - -
Aip03g03405 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Aip03g03405 596 Pfam Protein kinase domain 274 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03405 Aip-Chr3 111634881 111637461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03405 34 596 Receptor kinase-like Gene Family AT5G10290 56.007 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip03g03405 Pkinase 2.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03405 - - gmx:100800886 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03405 03 111634881 111637461 Aip03g03405 03 111634881 111637461 ECH