Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03403 ATGATTACTGGCCTCGTTTGCATCACTCCCGCCGCAGGTCTGGTTCAAGGATGGGCAGCCATAGTTATGGGAGTTCTATCAGGAAGTGTGCCATGGTACACCATGATGGTATTGGGCAAGAAGCTCACAATCTTCCAAATAGTCGACGACACTCTCGCCGTCTTCCACACCCACGCCGTCGCCGGACTCCTGGGCGGCATCCTCACGGGGTTTCTCGCGGAGCCACGGCTGAGTTCCCTGTTTCTTGCGGTGACCAACTCTAGAGGAGCGGTGTACGGAGGGTCGGCTGGGGGAGTTCAAATCCTGAAGCAATTGGTTGGAGGATTGTTCGTCATTGGATGGAATTTGGTAGCCACCTCCATAATTTGTGTGGTGGTGAAGTTGGTGGTTCCTTTGAGAATGACGGATGAAGAGTTGCTGATTGGTGATGATGCAGTTCACGGAGAAGAAGCTTATGCCTTATGGGGTGACGGAGAGAAACTTAGCCTCTACAAAGATGACACCACCCAGCATGGAATGGCAATGGCTTCCAGTGGTGCCACTCAAGTTGTCTAG 555 0.5261 MITGLVCITPAAGLVQGWAAIVMGVLSGSVPWYTMMVLGKKLTIFQIVDDTLAVFHTHAVAGLLGGILTGFLAEPRLSSLFLAVTNSRGAVYGGSAGGVQILKQLVGGLFVIGWNLVATSIICVVVKLVVPLRMTDEELLIGDDAVHGEEAYALWGDGEKLSLYKDDTTQHGMAMASSGATQVV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03403 184 PANTHER AMMONIUM TRANSPORTER 1 167 - -
Aip03g03403 184 SUPERFAMILY Ammonium transporter 1 134 - -
Aip03g03403 184 Pfam Ammonium Transporter Family 1 152 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aip03g03403 184 PANTHER AMMONIUM TRANSPORTER MEP2 1 167 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aip03g03403 184 Gene3D Ammonium transporter AmtB like domains 1 155 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03403 Aip-Chr3 111628929 111629869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03403 1 171 Inorganic Solute Cotransporters AT2G38290 59.064 1.23e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03403 K03320 - gmx:100785993 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03403 03 111628929 111629869 Aip03g03403 03 111628929 111629869 ECH