Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03402 ATGGCCAGTGCAGGTACCCCTTTGCCGGTAGCATACCAAGCATGGACGAGTCCAGCAGTACCGGACTGGCTAAACAAAGGGGACAACGCATGGCAGATGGTGTCAGCCACCCTGGTGGGGATACAGAGCATGCCCGGATTAGTCATCTTGTACGGAAGCATAGTCAAGAAGAAATGGGCCGTCAACTCCGCCTTCATGGCCCTCTACGCATTCGCCGCGGTTGTCATATGCTGGGTCACTTGGGCCTACAAGATGTCCTTTGGGGACAAGCTCCTGCCCTTCTGGGGTAAAGCTGGGCCCGCCTTGGGCCAGAAGTTCCTCATCAAGCAGGCCGCGCTCCCCGCAACGCCTCATTACTACAACACGGGGGCTCTGGAGACGGCGGAGATTGAGCCATATTATCCCATGGCCACCATGGTGTGGTTTCAGTGCGTTTTCGCAGCCATCGCTGTGGTCATACTGGCCGGCTCGGTGCTGGCTAGGATGAACTTCAAGGCGTGGATGATGTTCGTGCCGTTATGGTTGACTTTCTCGTACACCATAGGCGCGTTCAGCTTGTGGGGTGGTGGCTTCTTGTTCCAGTGGGGTGTTATGGACTACTCTGGTGGTTACGTCATCCATCTTTCCTCCGGCGTTGCAGGCTTCACCGCCGCTTATTGGGTATAA 666 0.5631 MASAGTPLPVAYQAWTSPAVPDWLNKGDNAWQMVSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWVTWAYKMSFGDKLLPFWGKAGPALGQKFLIKQAALPATPHYYNTGALETAEIEPYYPMATMVWFQCVFAAIAVVILAGSVLARMNFKAWMMFVPLWLTFSYTIGAFSLWGGGFLFQWGVMDYSGGYVIHLSSGVAGFTAAYWV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03402 221 Pfam Ammonium Transporter Family 30 219 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aip03g03402 221 PANTHER AMMONIUM TRANSPORTER MEP2 19 221 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aip03g03402 221 SUPERFAMILY Ammonium transporter 23 220 - -
Aip03g03402 221 Gene3D Ammonium transporter AmtB like domains 11 221 IPR029020 -
Aip03g03402 221 PANTHER AMMONIUM TRANSPORTER 19 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03402 Aip-Chr3 111627694 111628419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03402 136 221 Inorganic Solute Cotransporters AT2G38290 77.907 7.78e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03402 K03320 - gmx:100785993 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03402 03 111627694 111628419 Aip03g03402 03 111627694 111628419 ECH