Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03398 ATGGACTGCATAGAGGGAGAATCCGCGGCGGAGGAATGTTACCGGCCGTTGTCTGCTGAAGAAAAGGGAGGCAATGGAAGCAATGCCTTCGGCCCAGGTGGCAACGAATTCAGTGATGAAGTTGAGGATGGGGAATTAGGGGTGGAGTCGGATGCAGAGGAGAATTTTGGGGATAGCTTCTTTGACAACTGGGAAGAGAGAGTAGTGGACGACATTGCAGAGCTGGGGTGTATAAATTTCAAGGAAATAACTGCAAAGGAGATTATGATGTGTCATTTTCCGGATCGATCGGTGGCATTCTTGTTTTACAGTTTGTATGCGAAGATGAATAGTTTCGCTGTGAGAAAGAATAAGATTCGGCAAAATGTGAGGAATGAGGTTACTCAACAAGAATTTGTATGTTTCCGGCAGGGGTTCAGAGGAATAGGGTCCATTAACGACGGCAGGCGACGAAAACGTGAGCCAAAGGTAGAGACCAGATGTGGCTGTGAGGCAGAGATACGCGTCCACGTGCACTCCGATAGTGGTAGATGGATAATATCATACTTTCAGGACGTTCACAATCACGAGTTGCTGGACGATAGACTGACTTTCATGCTACCGTGCCATAGGAAAATGGATGCAGCCGCCGTGGAACAAATGAACATGATGCTTAGAGTTAGGATTAAAACGCCACATATTTATTTATCTTTTGTGCAGACTGCCGGGGGATTCCAAAACCTTCCGTTTCTAAAGAGGGATATGTATAACCAGATAGGGAAGCAACGGAGGCTCATTGACGAGGATGCGACGGCTTGCCGGAAGTTCCTGGAATCAATGGCACAGGCTAATCCTGGAATGTTTGTGCATTATTTGGCAGACAAGGATGATCGTTTGTCCACCTATTTTGGTCGGATAATTGCAGTCAGCTGGATTATGACAATTGTGTTTGCCGCTGTGCTAGTTGCAAATGAGAATGAGCAGACTTACACCTGGTTGCTGCAACAGTTCCTAGATGCCATGAAGGGTAAAGCACCTGGGTGTGTGATAACAGATGGGCATGGAGTGATGAAAAAGGCAATCAAAGCGGTGTTTCCTGGGGCCTATCACCGTTTGTGTGTGGCATCTGTTGAGGAATGCCACTTCTAA 1128 0.4681 MDCIEGESAAEECYRPLSAEEKGGNGSNAFGPGGNEFSDEVEDGELGVESDAEENFGDSFFDNWEERVVDDIAELGCINFKEITAKEIMMCHFPDRSVAFLFYSLYAKMNSFAVRKNKIRQNVRNEVTQQEFVCFRQGFRGIGSINDGRRRKREPKVETRCGCEAEIRVHVHSDSGRWIISYFQDVHNHELLDDRLTFMLPCHRKMDAAAVEQMNMMLRVRIKTPHIYLSFVQTAGGFQNLPFLKRDMYNQIGKQRRLIDEDATACRKFLESMAQANPGMFVHYLADKDDRLSTYFGRIIAVSWIMTIVFAAVLVANENEQTYTWLLQQFLDAMKGKAPGCVITDGHGVMKKAIKAVFPGAYHRLCVASVEECHF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03398 375 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 88 296 IPR031052 GO:0006355
Aip03g03398 375 MobiDBLite consensus disorder prediction 17 49 - -
Aip03g03398 375 Pfam FAR1 DNA-binding domain 102 192 IPR004330 -
Aip03g03398 375 Pfam MULE transposase domain 307 367 IPR018289 -
Aip03g03398 375 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 307 371 IPR031052 GO:0006355
Aip03g03398 375 PANTHER OS02G0262500 PROTEIN 307 371 - -
Aip03g03398 375 PANTHER OS02G0262500 PROTEIN 88 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03398 Aip-Chr3 111496649 111497956 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g03398 FAR1 4.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03398 - - aip:107633557 766.148