Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03375 ATGGAGAGGGCACGATTTGGGCTTATCCTTTGTTTGGTTCTTCTCATTGCTTCTCAGGAGATGGTGGTGCAAAGCGAGGGAAGAAAGTGTGATTCACAGAGCCATCATTTTAAAGGGAAATGCTTTAGCGACACAAACTGCGCATCCGTTTGCCATGGTAGCTTCATCCACGTTTTCGTTGAACTTGATCTTCAAAGTTAA 201 0.4428 MERARFGLILCLVLLIASQEMVVQSEGRKCDSQSHHFKGKCFSDTNCASVCHGSFIHVFVELDLQS 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03375 66 PANTHER DEFENSIN-LIKE PROTEIN 1 1 52 - -
Aip03g03375 66 SUPERFAMILY Scorpion toxin-like 28 53 IPR036574 -
Aip03g03375 66 Pfam Gamma-thionin family 28 52 - -
Aip03g03375 66 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Aip03g03375 66 Gene3D - 23 57 IPR036574 -
Aip03g03375 66 PANTHER DEFENSIN 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03375 Aip-Chr3 110616004 110617164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03375 1 51 Plant Defensins Gene Families AT5G63660 49.020 5.57e-10 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03375 - - pvu:PHAVU_009G158100g 73.9442