Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03336 CATATGAATTTGGTTGATGATATTTTATGTAGTGTTTTAAATTTATCCCGCGACCCCTCCGTGACCCCTTTCGTGGAGGAGCTCCACTCGAGGATCCTCCGGCACCACCAAGTCCAGGGAGCTGCTGCGGCAGCTGCGGCTTCGGATGATTTCAAGTTGAGCAAAGTGTACGACTCGGAAGAAGGGCAATCAAGAGAGGGACAGGATGAAGATGAAGATACCGATCCCGTTGGGGAGCAAGTGAAAGCCCAATCGAAGCAGAATGGTATCCAGAATGGCGATGGCATGAAGATCCTGCCGTTCGAGTTTGTGGCACTGGAGGCCTGCCTGGAGGCTGCGTGCAGTGTGTTAGAGAACGAGGCAAAAACCCTGGAACAGGAGGCCCACCCTGCCTTGGACAAGCTCACTTCCAAGATCAGTACTCTCAATTTGGAACGGGTTCGTCAAATTAAGAGCCGCCTTGTTGCCATCACTGGTCGCGTTCAGAAGGTAAGGGATGAGTTAGAACACTTGCTCGATGACGACGACGATATGGCTGAGATGTATCTCACCGACAAGTTACAACAGCTCCACAGTTCTTCTGCCTCCTCTATAAATGATGATGATGTTGACAATGACCACCATAATCAACTTGATGTCGATGACAGGCACGCCATTCCTCCTGAAATATCATTGGAAGAGGGTGGAGCTGCTGCAAGCGATGACGATCATCAACATGATGATGACAGGTTATTAGTGGGAGTTAGCAGGGACAGCCGTGCTAGCACTACCTACAGTACCACAACTAAGCATCTTGATGTGGAGGAGCTTGAGATGCTCCTGGAAGCATATTTTGTGCAAATCGATGGCACACTCAACAAGCTCTCTACTCTAAGGGAATACGTGGACGACACAGAGGACTACATCAACATAATGCTGGATGACAAACAGAATCATCTGCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGCCTTTGTCGTTGTCGCTGGTATTTTTGGCATGAACATTCATATTGAGCTATTTGATTCAAATATTACCGGGAATGGAGAGTTCTTCTGGACTGTTGGGGGCAGTGCTGCTGGAACCATTTTCTTGTATGTGGTTGCCATTGCCTGGTGCAAGTACAAACGCTTGCTCGAGTAG 1158 0.4862 HMNLVDDILCSVLNLSRDPSVTPFVEELHSRILRHHQVQGAAAAAAASDDFKLSKVYDSEEGQSREGQDEDEDTDPVGEQVKAQSKQNGIQNGDGMKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTDKLQQLHSSSASSINDDDVDNDHHNQLDVDDRHAIPPEISLEEGGAAASDDDHQHDDDRLLVGVSRDSRASTTYSTTTKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDSNITGNGEFFWTVGGSAAGTIFLYVVAIAWCKYKRLLE 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03336 385 Pfam CorA-like Mg2+ transporter protein 264 372 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aip03g03336 385 MobiDBLite consensus disorder prediction 57 89 - -
Aip03g03336 385 CDD Mrs2_Mfm1p-like 80 383 IPR039204 -
Aip03g03336 385 MobiDBLite consensus disorder prediction 193 212 - -
Aip03g03336 385 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 385 IPR039204 -
Aip03g03336 385 PANTHER MAGNESIUM TRANSPORTER MRS2-3 14 385 - -
Aip03g03336 385 Coils Coil 107 127 - -
Aip03g03336 385 Gene3D Magnesium transport protein CorA, transmembrane region 78 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03336 Aip-Chr3 109733794 109735691 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03336 16 385 MRS2 Gene Family AT3G19640 61.942 3.42e-145 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03336 - - adu:107488664 624.009