Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03325 ATGCTGAAGCTGGCAGAGAGAATGGTGATAAGCTTTTGTGGTGGAGTGAGTGCGTCAACAGCACACACGTGGACAACACTGAATGGGACAGGTGTCGATGATGTCAGAGTCATGACTCGAAAGAGCGTTGATGATCCTGGAAGACCACCTGGCATTGTTCTAACTTCTAAGTGCTGCCACTTCCTTTTGGCTTCCAGTTCCTCCCAAAAACAGCCTTTGATTTCCTCCGTGATGAGAATTCAAGAACCTCCACCAATAGTTGTCGCCGTCTGTCGGAGTGAGAGACTGCTGCCGCCGTCCATCGCATTCAAGAACTTCTGTCTTCGTGCTCTCGGGCCTCTCGCCGGATCCTCCACGTTGGGTGCTCGCATCTCGCCGTTCTCCTCTGTGCTCGGCTGCTCGCGCCTCCCTCCGCCAGTGAGTGCTCGAGCTGTGCGTGTTGGTTGCTGCTCGTCGTCCGTGGTTGTCTCTGCTCGAATCTGCCTCCCAGTCTCACTCGAGTCTTGTCTCAGTCACTGGCATCTCGTGGTTCGTCTGTCTCGTTGCCGGCGGCAGAAGCAACTCGTGGGGTTGTCTCTTGCTTCGTCGCCTTCCGTGGGGTGGTCGCCGACTCGCCGTCGACCGTTGAGACTGCAGTCTTCTTCGTCATTGCCCAACCTATTATTGCATCTTAGTTCCCTTGATTATTACCAGTATGGTAGCGGTAAGATTAGACTTCCCGTGGAGACTAGAATTCAAACGAAGAAATGTTTTCGATGTAAATTGAAAGTCAGGGATGAAGTGCCACAAAATGCTGATTTTCCCCGGCAATATGCAAGAAAAGAAAAGAAACCTTTTCCGACGCCCATTGTTGAGCTGCGACGAGCAGCTAGAGAAAGGTTAAAGATGATGAAAGGTCAGCCAGGGAAACCACTCTCGGCCCCAAAGAATGGGTTGCTTGTGAAGAGCCTTATACCAACTGCTTACAATGTGTATAATGCAAGGATCACTTTAATTAACAATCTGAAGAAGTTGCTCAAAGTAGTGCCGGTGCATGCTTGCGGGTGGTGCAGCGAAATCCATGTAGGACCTGTTGGACATCCATTTAAATCGTGTAAAGGTGCACAAGCCAATCTTCGCAAGGGACTCCATGAATGGATGAAGGCACATGTTGAAGACATGATAATACCAATTGAAGCCTATCACCTCGAAGATCGACTAGGAAAGAGGATTCCTCATGATGAGAGATTCTCTATCCCTCGAATACCAGCAGTGGTTGAGCTTTGTATTCAAGCTGGTGTTGAAATTCCAGAATTTCCTACCAAAAGAAGAAGAAAGCCCATAATTCGGATTGGGAGAAAGGAATATATTGATGCTGATGAAAGTGAACTGCCAAATGAAACCCCAGCAGAACCATTAAGACCACTACTAGCTGAAATAGCTGATTCAGAGATAGTAGCTCCATCGAGCAACGAAGAAATCGTTGCCCTTGCCGAGGAAACTCTCCAGGCATGGGAACGAATGAGGAAAGGTGCTAAGAGATTAATGAGGATGTATCCTGTGAGGGTCTGTGGATATTGCCCGGAAATCCATGTTGGTCCCCAGGGGCACAAGGCTCAAAATTGTGGAGCACACAAACACCAACAACGCAATGGGCAGCATGGTTGGCAGTCTGCAATTCTTGATGACTTGATCCCACCAAGATTTGTTTGGCATGTTCCTGATGTAAATGGGCCACCCTTGGAACGAGAGCTAAAAGATTTTTATGGGCAAGCTCCCGCTGTTGTGGAACTATGCATCCAGGCCGGTGCTGATTTACCGGAACAATATAAATCAACCATGCGACTCGATGTTGGGATCCCATCAACTATGAAAGAAGCTGAGATGATGCAACATGGAGCAGATTCTGTTAGAGATGGATAG 1902 0.4842 MLKLAERMVISFCGGVSASTAHTWTTLNGTGVDDVRVMTRKSVDDPGRPPGIVLTSKCCHFLLASSSSQKQPLISSVMRIQEPPPIVVAVCRSERLLPPSIAFKNFCLRALGPLAGSSTLGARISPFSSVLGCSRLPPPVSARAVRVGCCSSSVVVSARICLPVSLESCLSHWHLVVRLSRCRRQKQLVGLSLASSPSVGWSPTRRRPLRLQSSSSLPNLLLHLSSLDYYQYGSGKIRLPVETRIQTKKCFRCKLKVRDEVPQNADFPRQYARKEKKPFPTPIVELRRAARERLKMMKGQPGKPLSAPKNGLLVKSLIPTAYNVYNARITLINNLKKLLKVVPVHACGWCSEIHVGPVGHPFKSCKGAQANLRKGLHEWMKAHVEDMIIPIEAYHLEDRLGKRIPHDERFSIPRIPAVVELCIQAGVEIPEFPTKRRRKPIIRIGRKEYIDADESELPNETPAEPLRPLLAEIADSEIVAPSSNEEIVALAEETLQAWERMRKGAKRLMRMYPVRVCGYCPEIHVGPQGHKAQNCGAHKHQQRNGQHGWQSAILDDLIPPRFVWHVPDVNGPPLERELKDFYGQAPAVVELCIQAGADLPEQYKSTMRLDVGIPSTMKEAEMMQHGADSVRDG 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03325 633 PANTHER APO PROTEIN 2, CHLOROPLASTIC 237 623 - -
Aip03g03325 633 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 237 623 - -
Aip03g03325 633 Pfam APO RNA-binding 485 605 IPR023342 GO:0003723
Aip03g03325 633 Pfam APO RNA-binding 253 451 IPR023342 GO:0003723
Aip03g03325 633 ProSiteProfiles APO domain profile. 516 601 IPR023342 GO:0003723
Aip03g03325 633 ProSiteProfiles APO domain profile. 346 431 IPR023342 GO:0003723
Aip03g03325 633 Coils Coil 488 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03325 Aip-Chr3 109327825 109335237 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03325 1 62 Homeobox Transcription Factor Family AT1G05230 80.645 1.74e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03325 - - aip:107630864 1076.62