Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03316 ATGGAGGGAAAAAAGCTGTCTGCTTCTCTAATACAACTCAACATCTGGGGAAGCCCTTTTCTGGGCAAACGATGTCAGATGAAGGATCCACAGCTTTGGCCCAAAATCTCCCACATTCCCGCCATTCAAGTTGATGACACATGGATTTGTGTTCTCACTCTCACTCCAGCTTGCGTTGTCTCGCCCCTGGTTCATTCTCTCGTGTCGTCATCTTCTCGCCTGCACTACCGTCTTCTCGCCGGTTTCATCGTCTGCTCGTCCCACGGCCTGCCTATTCTATCTGGATGCTCTGCTGGAGGATTGGCTGCTATATTGAACTGCGATCGCTTCAAATCCTTCCTACCAAATAGCGCCAGAGTGAAATGCGTGCCAGATGCCGGCTATTTTATCCATGTACCAGATGTCTCCAGAATAAAGCACATTGAAAATTTCTACAAAGGAGTTGTTGAAACTCATGTACTCTACTCTAGTCTTGGCCTTCTTTAA 486 0.4753 MEGKKLSASLIQLNIWGSPFLGKRCQMKDPQLWPKISHIPAIQVDDTWICVLTLTPACVVSPLVHSLVSSSSRLHYRLLAGFIVCSSHGLPILSGCSAGGLAAILNCDRFKSFLPNSARVKCVPDAGYFIHVPDVSRIKHIENFYKGVVETHVLYSSLGLL 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03316 161 PANTHER PECTIN ACETYLESTERASE 7 92 153 - -
Aip03g03316 161 Pfam Pectinacetylesterase 92 154 IPR004963 GO:0016787
Aip03g03316 161 PANTHER NOTUM-RELATED 92 153 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03316 Aip-Chr3 109243388 109245772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03316 92 158 Carbohydrate Esterase AT5G45280 61.194 7.85e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03316 K19882 - egr:104444195 92.4337