Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03315 ATGCAAGAGCAAACACAATGTTACCTTGAGTTAATTAGCAACGATGATCTGGCCATATCTCCGACAATGATGACATGGATTCGAGAGTTGGATCCACCTAGTAAACAAAGGTCGAGGGGCACAAGCCCATATTGGTTGCGAAGAGCGAAACCTACTGTGTCACTAATAAATCCCGATCTCCTTCCTGCTACAGGTGGATGGCTGTCGGAATCGGATGGTCAAAAGGCGAACCCCAAGTCAATGGGTGTTTTCAGTCATTTCTTATTTGGTTTTCCTCAAAACTGGGAAAGCTATGCAGAAAATTTGATTAGAGATGAATCAACTATTGGCACTCATTTGGGTAGTGTTGTTCCTAAAAATGTATCATCAAATGATCCTGAGATCTTCTCTGCTGCTCAAGAAAAATCTATCCTGTCTTATTCGAAACCTTTAAAGGAAGTATTTGGAGCTCATGGGAAGCCACATGCTAAAGGTGAATGGCATGATTCTAACGCTACATGTAGGGTTAATGCCGCTCAAGGTAGTGGCAGCATTAGACGTATTAGCAGGTATCATAACATGAAAGTCTGTCAGCAGAAGCAGCCAGCTTCTGGAATTACTCTGAAACATCCAGAGGAACTGAATAGTCCACCGACACCAGCTCAGCTACAATCTCTAGAAAAAGTAACTACAGTAAAAGTAAATACATCATCTGAACATCTCGATGAAAGTTCTACATCTAGAGTTTCTAGAACTTTATTTAAAAATAAAGAAGGTTGTTCTAGGAGAAAGAAAGCTACAAGTAAAAAAAGTCAGATCACGTGTGAAAGAAAAAGGGCTAGATCTGCCACTGCAACCAAATATCCACGAAAAAGGGGTTTAAGCCCCTCGATCGTTGGTGAGAAAGAGAAGATATCCTCAATGTCTGCTCTATCAAGTTTCAAAAAGTCCAGATCAAGAAGGTTGCTTCTACCACCCTTAGAGTTTTGGCGTAACCAGATACCGATTTACAATGCGTCCCCTCACCCTTATGTACGGCGCCACCATTCCCTCTCAGCCCTCTTTCTGTCTCTCACCAGCCATCGTCACCACTCACCATCCTCAGAGTCATCTTGGCCCACGCCGAAGCTCTTCTGTTCGACTGCTTCTCTCACCTTCATGGCTACGGTGCTGCACTGCTTCTCGGTGATGACGACCCTCAGCGACGACGACACCACCAGTGGCTGCGAAGTTCGACGGTGCTTCTCTGTTCTATTTTCCCGGGCTGCTGTCCCCGATTGTCTTCTTCTTCTCTGCCACCATCAGTCAGCCATTAGAAGTCCCGACGAAGAGGAAGAAGTAGTGCGTGTCTTCACTAGCGTTCCCATTGTGAAATGGCATGATCTGTTCTCTCTTGAGACCACAGTTGGGGTTTATATTATCATAAGGGGTTTCATTGACGAGCAGCACACCATTGATAATGGTTTCCCTCCTGAGATTTCTCAACAAAAATCTATCTTGTCTTCTTCGAAACCTTTAAAGGAAGGATTTGGAGCTCATGGGAAGCCACATGCTGAAGGTGAATGGCATGATTCTAACGCTACATGTGGGGTTAATGCCGCTCAAGGTAGTGGCAATGTTAGACGTGTTACCAGGTATCATAACATGAAAGTCTGTCAGCAGAAGCAGCCAGCTTCTGGAATTACTCTAAAACATCCAGAGGAACTGAACAGTCCACTAACACCAGCTCAGTTGCAATCTCTGGAAAAACTCATGATATTTAGCAAGTGGAGGTCAATCTGTGCTAAAGCTAATGTAAAACTAAGATGTTAA 1791 0.4405 MQEQTQCYLELISNDDLAISPTMMTWIRELDPPSKQRSRGTSPYWLRRAKPTVSLINPDLLPATGGWLSESDGQKANPKSMGVFSHFLFGFPQNWESYAENLIRDESTIGTHLGSVVPKNVSSNDPEIFSAAQEKSILSYSKPLKEVFGAHGKPHAKGEWHDSNATCRVNAAQGSGSIRRISRYHNMKVCQQKQPASGITLKHPEELNSPPTPAQLQSLEKVTTVKVNTSSEHLDESSTSRVSRTLFKNKEGCSRRKKATSKKSQITCERKRARSATATKYPRKRGLSPSIVGEKEKISSMSALSSFKKSRSRRLLLPPLEFWRNQIPIYNASPHPYVRRHHSLSALFLSLTSHRHHSPSSESSWPTPKLFCSTASLTFMATVLHCFSVMTTLSDDDTTSGCEVRRCFSVLFSRAAVPDCLLLLCHHQSAIRSPDEEEEVVRVFTSVPIVKWHDLFSLETTVGVYIIIRGFIDEQHTIDNGFPPEISQQKSILSSSKPLKEGFGAHGKPHAEGEWHDSNATCGVNAAQGSGNVRRVTRYHNMKVCQQKQPASGITLKHPEELNSPLTPAQLQSLEKLMIFSKWRSICAKANVKLRC 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03315 596 MobiDBLite consensus disorder prediction 248 287 - -
Aip03g03315 596 MobiDBLite consensus disorder prediction 262 276 - -
Aip03g03315 596 Pfam SANTA (SANT Associated) 435 488 IPR015216 -
Aip03g03315 596 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 438 489 - -
Aip03g03315 596 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 80 129 - -
Aip03g03315 596 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 220 332 - -
Aip03g03315 596 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 220 332 - -
Aip03g03315 596 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 80 129 - -
Aip03g03315 596 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 438 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03315 Aip-Chr3 109140970 109151450 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip03g03315 SANTA 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03315 - - adu:107480063 347.436