Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03314 ATGGCGCCACCTTTCCCTCTCAGCCCTCTCTCTGTCTCTCACCAGCCACCGTCACCACTCACCAGCCTCAGAGTCACCTTGGCCTGTGCCGAAGCTCCTCTGTTCGACTGCTTCTCTCACCTTCATGGCCACGGTGCTGCACTGCTTCTCGGTGACGACGATCCTCAACGACAACGACACCACCAATGGCTACAAAGTGTGATGACGCTTCTCTGCTCTATTTTCCCGGGGCTGCTGTCCTCGGTCGTCTTCTTCTTCTCTGCCACCATCTGTCAGCCATTAGAAGTCCCGGCGAAGAATAACGGGGATTTCACTGTTTCCCATGTTTGCTTGTATGAATGGTGGCTGGTTAAAGCTAAACAAGGATTCGAAGGAAAGCAGGAAAAAGTAGTACGTGTCTTCACCAGTGCTCCAATTGCAAAACGGCATGATCTGTTCTCTCTTGAGACCACAGATGGGGTTTATATTATCATAAAGGGTTTCATTGACGAGCAGCGCATCATTGATAATGGTTTCCCTCATGAGGTCTTCAGTCATTTCTTATTTGGTTTTCCTCAAAATTGGGAAAGCTATGCAGCAGATTTGATTAAGGATGAACCAACTATTGGCACTGATTTGGGTAGTGCTGTTCCTAAAAATGTATCATCAATTGATCCTGAGATCTTCTCTGCTAGTAAATATTTGGACGACGTTGCATGA 699 0.4735 MAPPFPLSPLSVSHQPPSPLTSLRVTLACAEAPLFDCFSHLHGHGAALLLGDDDPQRQRHHQWLQSVMTLLCSIFPGLLSSVVFFFSATICQPLEVPAKNNGDFTVSHVCLYEWWLVKAKQGFEGKQEKVVRVFTSAPIAKRHDLFSLETTDGVYIIIKGFIDEQRIIDNGFPHEVFSHFLFGFPQNWESYAADLIKDEPTIGTDLGSAVPKNVSSIDPEIFSASKYLDDVA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03314 232 Pfam SANTA (SANT Associated) 109 191 IPR015216 -
Aip03g03314 232 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 104 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03314 Aip-Chr3 109134340 109137195 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip03g03314 SANTA 1.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03314 - - lja:Lj0g3v0006579.1 148.288