Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03312 ATGGCTGAGCTTACTTCAACTCCATCCAATTCTAAAAACGCCAATTTATCTTGTTTCCAACCAACGGTTTGCTTGTATGAATGGTGGCTGGTTAAAGCTAAACATGGATTCGAAGGAAAGCAGTTAGCCATTGGAGGCATTGCATCAAAAAGGGAAGAAGTAGTGCGTGTCTTCACCAGTGCTCCCATTGCGAAACGGCATGATCTGTTCTCTCTTGAGACCACAGATGGGGTTTATATTATCATAAGGGGTTTCATTGACGAGCAGCGCACCATTGATAATGGTTTCCCTCCTGAGGTTTTCAGTCATTTCTTATTTGGTTTTCCTCAAAACTGGGAAAGCTATGCAGCAGATTTGATTAGGGATGAATCAACTATTGGCACTGATTTGGGTAGTGCTGTTCCTAAAAATGTATCATCAATTGATCCTGAGATCTTCTCTGCTGCTCAAGAAAAATCTATCCTGTCTTCTTCGAAACCTTTAAAGGAAGCATTTGGAGCTCATGGGAAGCCACATGCTGAAGGTGAATGGTATGATTCTAACGCTACATGTGGGGTTAATGCTGCTCAAGGTAGTGGCAGCATTAGACGTGTTACCAGGTATTATAACAGGAAAGTCTGTCAGCAGAAGCAGGCTGCTTCTGGAATTACTCTGAAACATCCCGAGGAACTGAACAGTCCAGTGACACCAGCTCAGTTGCAATCTCTGGAAAAAGTAACTACAGAAAAAGTAAATACACCATCTGAGCATCTCGATGAAAGCTCTACATCTAGAGTTTCTAGAACTTTATTTGAAAATGAAGAAGGCTGTTCTAGGAGAAAGAAAGCTACAAGTGAAAAAGGTCAGATCACGTGTGAAAGAAAAATGGCTAGATCTGCCACTGCAACCAAATATCCACGAAAAAGGGGTTTAAGCCCCTCGATCATTGGTGAGAAAGAGAAGATATCCTCAGTGTCTGCTCTATCAAGTTTCAAAAAGTCCAGATCAGGAAGGTTGCTTCTACCACCATTAGAGTTTTGGCGTAACCAGATACCGATTTACAATGCGGACCATGAGGTTACAGAAATTCAGGGAGGTGCATCTGTGGAGAATTTGACATATTTTAGAGGTTTTCCCCTACGAAGATTCCCATGGCACCTTCACCAGCACTGA 1152 0.4236 MAELTSTPSNSKNANLSCFQPTVCLYEWWLVKAKHGFEGKQLAIGGIASKREEVVRVFTSAPIAKRHDLFSLETTDGVYIIIRGFIDEQRTIDNGFPPEVFSHFLFGFPQNWESYAADLIRDESTIGTDLGSAVPKNVSSIDPEIFSAAQEKSILSSSKPLKEAFGAHGKPHAEGEWYDSNATCGVNAAQGSGSIRRVTRYYNRKVCQQKQAASGITLKHPEELNSPVTPAQLQSLEKVTTEKVNTPSEHLDESSTSRVSRTLFENEEGCSRRKKATSEKGQITCERKMARSATATKYPRKRGLSPSIIGEKEKISSVSALSSFKKSRSGRLLLPPLEFWRNQIPIYNADHEVTEIQGGASVENLTYFRGFPLRRFPWHLHQH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03312 383 Pfam SANTA (SANT Associated) 23 115 IPR015216 -
Aip03g03312 383 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 219 360 - -
Aip03g03312 383 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 7 147 - -
Aip03g03312 383 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 219 360 - -
Aip03g03312 383 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 7 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03312 Aip-Chr3 109114869 109117973 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip03g03312 SANTA 5.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03312 - - adu:107480063 404.445