LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g03307	ATGAACCGATTTCCAACATGGAGAGTAATGGCTGTGTTGTTCCTACAACTCAGTTTTTCCATGGAGATCTTCTGCCTCTCTTCTTCTCATGCAGATAGAATTTCTCATCTTCCTGGACAACCCCATGTAGGCTTTCAACAGTTCTCAGGATATATTACAGTGGATGACAAGAAACACAAGGCTCTGTTTTACTATTTTGTTGAATCAGAAGCTGATCCAGCCTCAAAGCCTCTTGTGCTGTGGCTCAATGGAGGACCTGGTTGTTCTTCCCTTGGAGTAGGTGCATTCTCAGAAAATGGACCTTTCAGGCCAGATGGGGAAGCTCTTGTTCAAAATGAGTATAGTTGGAACAAAGTGGCAAACATGTTGTATTTGGAGACACCAGCTGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCTTATATCAGAGTGAATGATGAAATAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTTGACAAATTCCCTCAATTCAAGCACAGAGACTTGTTTGTAACAGGTGAAAGTTATGCAGGCCATTATGTTCCACAACTAGCAAAGCTCATGACTGAGATCAACAAAAAGGAGAAGATATTCAATCTGAAAGGCATAGCTTTGGGTAATCCACTTGTAGAATATGCCACTGACTTCAATTCAAGGGCTGAGTTTTTTTGGTCTCACGGATTAATATCAGATTCAACTTATGAAATGTTCACCACAGATTGTAACTATTCTCGGTATGTCAGTGAATACTATAGAGATTCAGTTTCCCCCATTTGTTCAAAGGTTATGAGCCAAGTAAGCAAAGAAACAAGCAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATCTCCTCAGTCCTTTCACAGTCCAAAGTTATTTGCCCGCAAACCCAAAAAGAAAATGAGAGCATTGATGTGTGCGTAGATGACAAAGTTACAAATTATTTGAACAGAAGAGATGTGCAGCAGGTGCTCCATGCCAAGCTTATTGGAGTTCGCAAGTGGGATGTCTGCAGCAACATCCTTGACTATGATATGCTCAACCTGGAAGTTCCTACACTCCCTGTTGTTGGAGCACTCCTAAAAGCTGGAGTTAGGATCTTAATTTACAGCGGTGATCAAGATTCAGTGATTCCACTGACCGGAAGCCGCACCTTGGTTCAAAAGCTGTCAAAACAATTCGGACTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGTCAACAGGTTGGTGGATGGACTCAAGTTTATGGCAACATTCTGTCATTTGCAACCATCAGAGGGGCCTCCCATGAAGCTCCTTTCTCACAGCCTGAAAGATCACTTGTTTTATTTAAGTCATTCTTGGAAGACAAGCCTCTACCTGAAATTTTCTGA	1398	0.4192	MNRFPTWRVMAVLFLQLSFSMEIFCLSSSHADRISHLPGQPHVGFQQFSGYITVDDKKHKALFYYFVESEADPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPDGEALVQNEYSWNKVANMLYLETPAGVGFSYAKGSSSYIRVNDEITARDNLVFLQRWFDKFPQFKHRDLFVTGESYAGHYVPQLAKLMTEINKKEKIFNLKGIALGNPLVEYATDFNSRAEFFWSHGLISDSTYEMFTTDCNYSRYVSEYYRDSVSPICSKVMSQVSKETSKFVDKYDVTLDVCISSVLSQSKVICPQTQKENESIDVCVDDKVTNYLNRRDVQQVLHAKLIGVRKWDVCSNILDYDMLNLEVPTLPVVGALLKAGVRILIYSGDQDSVIPLTGSRTLVQKLSKQFGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEDKPLPEIF	465

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g03307	465	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	26	463	IPR001563	GO:0004185\|GO:0006508
	Aip03g03307	465	Gene3D	alpha/beta hydrolase	29	290	IPR029058	-
	Aip03g03307	465	Gene3D	-	359	457	-	-
	Aip03g03307	465	Gene3D	-	313	349	-	-
	Aip03g03307	465	Pfam	Serine carboxypeptidase	39	457	IPR001563	GO:0004185\|GO:0006508
	Aip03g03307	465	ProSitePatterns	Serine carboxypeptidases, histidine active site.	428	445	IPR033124	GO:0004185
	Aip03g03307	465	ProSitePatterns	Serine carboxypeptidases, serine active site.	175	182	IPR018202	GO:0004185
	Aip03g03307	465	PRINTS	Carboxypeptidase C serine protease (S10) family signature	112	124	IPR001563	GO:0004185\|GO:0006508
	Aip03g03307	465	PRINTS	Carboxypeptidase C serine protease (S10) family signature	125	135	IPR001563	GO:0004185\|GO:0006508
	Aip03g03307	465	PRINTS	Carboxypeptidase C serine protease (S10) family signature	161	186	IPR001563	GO:0004185\|GO:0006508
	Aip03g03307	465	PRINTS	Carboxypeptidase C serine protease (S10) family signature	428	441	IPR001563	GO:0004185\|GO:0006508
	Aip03g03307	465	SUPERFAMILY	alpha/beta-Hydrolases	35	462	IPR029058	-
	Aip03g03307	465	PANTHER	CARBOXYPEPTIDASE	26	463	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip03g03307	Aip-Chr3	108763781	108766788	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip03g03307	321	461	Calmodulin-binding Proteins	AT2G22960	26.950	2.71e-14	69.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g03307	K16297		-	gmx:100800002	825.083