Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03297 ATGAAAGTAACAGAATCCGAAGCGGAGGCGGAGGGGGTGACCGTAAGGGAGTGCATTGAAGTGATGTCAAGCCTCCTGAGCGAAATCCCATCCATGGAGAGCTTCAAGGGAAAGTGGTCACTCATCGGAGCCACACTGACACACCTCCAAACCCACCTCTCCGACTCCGATTTCCCCGCCTCAAACCCACTATCCCTCGACCTCCTCCGCTCTCTCTCGCAAACGCTCCACCACGCTCTCTCCCTCGCCCAACACTGCCACTCCCCCAACCCCCCTCACGGCAAGCTCAAGACACAGAGCGACCTCTACTCCCTCCTCGACACCCTCAACCGCCACCTCTACGACTCCACCATCCTCTCCCGCACCCATATCGACAACGCCGCCGCCCTCTCCACCAACCCCCGCGACTCTCTCAGATCCCAATCCAGGAACCTCATCACCCGCCTCCAAATCGGCTCACCCGACTCTCGAAACTCCGCCATGGACTCCCTGCTTTCTCTTCTCCATCAGGACGACAAGAACGTCGTCATCGCCGTCGCGCAGGGCGTGGTCCCGGTACTCGTGCGCACACTGGATCACTCCACCTCCTCTGAGTCCAAGGAAAAAGCCGTTGCCGCCATCGCCAGAATCTCAACCGTCGACACCAGCAAGCCCGTCCTCGCTGCCGAGGGCTTGCTTCTCCTCAACCATCTCCTCCGGGTCCTCGATTCCGGAAGCGGGTTCGCGAAGGAGAAAGCCTGCATAGCGCTTCAGGCGCTGAGTTACTCGAAGGAGAACGCCAGGGCCATAGGCTCACGCGGCGGAATCTCGTCGCTCTTGGAGATCTGCCAAGCTGGCACTCCCGGTTCTCAAGCCTCCGCCGCCGGCGTTCTCAGGAATTTATCGCGCTTCGCCGAGATCAAGGAGAATCTCGTAGAAGAAAACGCTGTTTTCGTCCTCTTGGGTCTCGCTTCTTCCGGAACTGCGTTGGCGCAAGAGAATGCCATCGCCTGCCTCTGTGGTTTAGTCTCTGAGGACCAAAGCTTGAAGCTTTCGGTGGTTAGGGAAGGTGCGCTGGAGAGCTTGAAGAATTTCTGGGAGTCGGGTCGGAGCCCCGATGTAGCAATTGAATTTCTGGGTCAGCTGGCTTCGTGTTCGCGCGTGGCGGACGTTGTTGTCTCCGATGGGTTTGTTGTGCCGCGTGTGGTGGCTGCATTGGGGTCCGGAGTTATGGCGAGGTACCCGGTGTCGTTGCTGGAGTCGCTGGTTCATTCCAAGAAGTGTAAGAAGCAGATGGTTGCTGCTGGTGCTTGTGTTTACACTCAGAAGCTTGTGGACATGGATGTCCCTGGTTCCAAGAAGCTCTTAGAGAGCCTTGGTCGTGCCAAGATTTGGGGTGTTTTTGCTAGACCCTAA 1395 0.5792 MKVTESEAEAEGVTVRECIEVMSSLLSEIPSMESFKGKWSLIGATLTHLQTHLSDSDFPASNPLSLDLLRSLSQTLHHALSLAQHCHSPNPPHGKLKTQSDLYSLLDTLNRHLYDSTILSRTHIDNAAALSTNPRDSLRSQSRNLITRLQIGSPDSRNSAMDSLLSLLHQDDKNVVIAVAQGVVPVLVRTLDHSTSSESKEKAVAAIARISTVDTSKPVLAAEGLLLLNHLLRVLDSGSGFAKEKACIALQALSYSKENARAIGSRGGISSLLEICQAGTPGSQASAAGVLRNLSRFAEIKENLVEENAVFVLLGLASSGTALAQENAIACLCGLVSEDQSLKLSVVREGALESLKNFWESGRSPDVAIEFLGQLASCSRVADVVVSDGFVVPRVVAALGSGVMARYPVSLLESLVHSKKCKKQMVAAGACVYTQKLVDMDVPGSKKLLESLGRAKIWGVFARP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03297 464 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 1 404 - -
Aip03g03297 464 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 404 - -
Aip03g03297 464 SMART arm_5 171 212 IPR000225 GO:0005515
Aip03g03297 464 SMART arm_5 256 296 IPR000225 GO:0005515
Aip03g03297 464 SMART arm_5 297 337 IPR000225 GO:0005515
Aip03g03297 464 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 406 462 - -
Aip03g03297 464 Gene3D - 138 448 IPR011989 -
Aip03g03297 464 SUPERFAMILY ARM repeat 144 399 IPR016024 -
Aip03g03297 464 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 406 462 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03297 138 420 U-box Gene Family AT2G23140 29.371 6.73e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03297 - - tcc:18605178 449.514