Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03290 ATGGAAAAGTTAAATTTTGTGAAGAAGAATGGGGTAAGTAGAATGCCTCCTGGATTCAGATTCCAGCCAACGGATGAAGAGCTTGTGTTTCAGTATTTGAAATGTAAGGTCTTCTCATTCCCCTTGCCCGCTTCCATGATTCCTGACATCAATCTCTCCAACTATGATCCTTGGGATTTGCCAGGAAATTGTGATGAACATCAAGAGATGTATTTCTTCAGCAGCAAGGAACCCAAGTATAGAAATGGAAGCCGCATGAACCGAACAACCACCTCTGGCTATTGGAAGGCAACAGGATCCGACAAAAGAATCATTTCATCTTCTAATAATAGTGACGATAATAGCATTCTTGGCATTAGAAAAACCCTAGTGTTTTACCAAGGGAAATCTCCCAATGGCACTAGAACTCACTGGGTCTTGCATGAATATCGCCTGGTTAGTACTACTCTACATGCTAATAACAATGCTTGCGATATAGGAGATTGGGTTCTGTGTCGCTTATCGGTGAAGAAAAGGAGTGTTGGGAGTGGTAGTATCATCATAAGCAAGAAAGCACGTTCTTCACCATCTTCATCCTCATCTTCTTCCACTTCAAGTAATAACGTCATGGAAGTATCTTCTTCATATGCTTCTTAA 636 0.4104 MEKLNFVKKNGVSRMPPGFRFQPTDEELVFQYLKCKVFSFPLPASMIPDINLSNYDPWDLPGNCDEHQEMYFFSSKEPKYRNGSRMNRTTTSGYWKATGSDKRIISSSNNSDDNSILGIRKTLVFYQGKSPNGTRTHWVLHEYRLVSTTLHANNNACDIGDWVLCRLSVKKRSVGSGSIIISKKARSSPSSSSSSSTSSNNVMEVSSSYAS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03290 211 Pfam No apical meristem (NAM) protein 16 145 IPR003441 GO:0003677|GO:0006355
Aip03g03290 211 MobiDBLite consensus disorder prediction 182 211 - -
Aip03g03290 211 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 180 - -
Aip03g03290 211 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 7 180 - -
Aip03g03290 211 SUPERFAMILY NAC domain 12 170 IPR036093 GO:0003677|GO:0006355
Aip03g03290 211 Gene3D NAC domain 24 175 IPR036093 GO:0003677|GO:0006355
Aip03g03290 211 ProSiteProfiles NAC domain profile. 15 170 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03290 Aip-Chr3 108003361 108004457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03290 1 173 NAC Transcription Factor Family AT5G13180 56.647 3.06e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip03g03290 NAM 9.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03290 - - adu:107480040 368.237