Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03265 ATGGGGTGTTTTACTGTTTTGAAAAGCAAGAAGAAAAAGCATGACCAAATTGCATATGTAAAACGAGTAAGCCACAGTGAGCATGTACCTACAATATTGCCTGAACCTCATACTCGCACGCTCCAATCTGCACCTCCTAGTTTTAGGACAAGAGTTAAACCCATTCAACCTAGTAAAATGACTTACAATAGAACAAGAGCATTATCTGCTCCATCAACTCTTGACACAGCGGAACAAGATGCTTTAGCTTCGGTTGAGTATGAGGAACAAGAAGAGTTGAGACACCGAGGAGGAGGATCAATGAAGGAGCAGCATTTGTCTAGCCCACAACCTTTACCGCTTCCATCTCCTAAGGGTGGCAGTTCATTGAACGCAATGGGCAGCTTTAAGTCAGTGACAGCTAATGTTCCTCCAAATTCTTCTGGACCTTTGCCGCTTCCACCTACAGGGTCACTTCGAAACTTTCAGTATGAGGAAATTGCAGCTGCTTGCCTCAATTTCTCCTTAGATCGATGCATGTCGGAATGCCTTTCCTCCACCATATATAAAGCTTCCTTTGGCGATGATTCTTCTTCAAGCTCAAAGAAGTTTGAAGCCACTGTCACGCGTCTACACCCATCAAATCAGGGCTTAAAGGAATTCATAAGTGAGGTCAATACTATAGCATCTTTGCAGCATCCAAACCTCTGTAAATTGCTAGGGTTTCATGCGCGTGAAGGTAAGGAACAAAGAATGCTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCCTGTTGTACGTGAGATCTGATGGCCCGTCTCTTGATTGGAACACAAGAATGAAAATCGCTATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACAGCTAACATACAGATAGACAAAGATTTCAGTGCCAAGCTTTCAGGGTACGGTTGCGTTGGACAACTTCCCGAGGAAGAGATATCGAGCAGTTCATCCGCTGTTGGCAACCTATCAATGGAGACACTGGAAAAAGGAATGCTCACACCAAAAAGCAACGTATGGAGTTTTGGAATTTTTCTTCTAGAGCTTCTTACTGGAAGAAAGAATCTGGATAGTCGTCACCCCAAGGAAGAGAGAAATTTGGTCAAGTGGAGCCGTCCCTTCCTAGCCGATGATTATCGACTCTCATTGATTATGGATCCTCAACTGAAGGGTCGCTTTCCCTCCAAAGCGGCGAGAACTGTAGCTGACATTGCCCAAAGATGCCTTCAGAAGGAGCCGTCCGAAAGACCAACCATGAGGACTGTTGTCAAGCACCTCAAAATGATACAGGATTTAATTAAAAAATATCATGATATAATATCAGAATTTGAGAAGTTTATAAAAAAGTTGGCAGAAGTTCAGGCTCAACATGCCTAG 1428 0.4349 MGCFTVLKSKKKKHDQIAYVKRVSHSEHVPTILPEPHTRTLQSAPPSFRTRVKPIQPSKMTYNRTRALSAPSTLDTAEQDALASVEYEEQEELRHRGGGSMKEQHLSSPQPLPLPSPKGGSSLNAMGSFKSVTANVPPNSSGPLPLPPTGSLRNFQYEEIAAACLNFSLDRCMSECLSSTIYKASFGDDSSSSSKKFEATVTRLHPSNQGLKEFISEVNTIASLQHPNLCKLLGFHAREGKEQRMLVYERLYHGSLDRLLYVRSDGPSLDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGQLPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDYRLSLIMDPQLKGRFPSKAARTVADIAQRCLQKEPSERPTMRTVVKHLKMIQDLIKKYHDIISEFEKFIKKLAEVQAQHA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03265 475 ProSiteProfiles Protein kinase domain profile. 167 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03265 475 MobiDBLite consensus disorder prediction 121 139 - -
Aip03g03265 475 Gene3D Transferase(Phosphotransferase) domain 1 251 466 - -
Aip03g03265 475 MobiDBLite consensus disorder prediction 87 101 - -
Aip03g03265 475 SUPERFAMILY Protein kinase-like (PK-like) 142 451 IPR011009 -
Aip03g03265 475 MobiDBLite consensus disorder prediction 86 142 - -
Aip03g03265 475 Pfam Protein tyrosine and serine/threonine kinase 179 443 IPR001245 GO:0004672|GO:0006468
Aip03g03265 475 PANTHER OS01G0822200 PROTEIN 42 458 - -
Aip03g03265 475 Coils Coil 467 475 - -
Aip03g03265 475 Gene3D Phosphorylase Kinase; domain 1 147 249 - -
Aip03g03265 475 PANTHER OS01G0588500 PROTEIN-RELATED 42 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03265 Aip-Chr3 106919561 106922697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03265 146 455 Receptor kinase-like Gene Family AT4G02010 36.991 5.06e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Aip03g03265 PK_Tyr_Ser-Thr 3.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03265 - - gmx:100809117 756.903