Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03263 ATGGTGCTTGCTTTCGACAGACGGTTCACCTTCCGTGAACTACAAATTGCTACTGGAAATTTCAGTCAAAAGAACATCCTTGGACAAGGAGGCTTTGGAATTGTCTACAAAGGATGCCTTACAAATAAAATGCTGGTGGCAGTGAAGAGGCTGAAAGATCACAATTACACTGGAGAAATGCAATTTCAAACTGAAGTTGAGATGATCGGCTTGGCTGTGCATCGTAACCTTTTGCGTCTCTATGGATTTTGTATGACTCCAGATGAAAGGTTACTTGTTTATCTCTACATGCCTAATGGCAGTGTTGCTGATCGCTTGAGAGAATGGGAGGGGGAGGTCTGGAAGAAAGAAGGCAGGGGAGGCCTTGTCACCGTCGATCCACTACCTTGGAGCTCGCCGTCGAGCTGCTTTGCGGCGCCGTTCATGGAGTCACTAGTTCGCGTCACCGCTGATCATCGTCGAGCCACCGTCAGAAGCCGAACAGCGAAGGAGAAGAACGCAAGGCAGGGGCCGACGAGACAGAGGAAGGGCGCGCGTGTAGGAGCTCAGCTGCGGGAGAGGAGAGGcgcgtccgaacctttgccgccgttggagccgtgcagagagagacgcgaagagggagagcagtcgcgcatccagatgcatcctcaccaccgcgggaggaatcgtcgccgtcgccctggggtgtag 690 0.4174 MVLAFDRRFTFRELQIATGNFSQKNILGQGGFGIVYKGCLTNKMLVAVKRLKDHNYTGEMQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLVYLYMPNGSVADRLREWEGEVWKKEGRGGLVTVDPLPWSSPSSCFAAPFMESLVRVTADHRRATVRSRTAKEKNARQGPTRQRKGARVGAQLRERRGASEPLPPLEPCRERREEGEQSRIQMHPHHRGRNRRRRPGV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03263 229 Gene3D Phosphorylase Kinase; domain 1 3 96 - -
Aip03g03263 229 SUPERFAMILY Protein kinase-like (PK-like) 7 110 IPR011009 -
Aip03g03263 229 SMART tyrkin_6 21 229 IPR020635 GO:0004713|GO:0006468
Aip03g03263 229 MobiDBLite consensus disorder prediction 197 215 - -
Aip03g03263 229 MobiDBLite consensus disorder prediction 153 229 - -
Aip03g03263 229 Pfam Protein tyrosine and serine/threonine kinase 23 109 IPR001245 GO:0004672|GO:0006468
Aip03g03263 229 PANTHER OS02G0236100 PROTEIN 5 111 - -
Aip03g03263 229 ProSiteProfiles Protein kinase domain profile. 21 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03263 229 PANTHER OS01G0253100 PROTEIN 5 111 IPR045271 GO:0004714|GO:0006468
Aip03g03263 229 MobiDBLite consensus disorder prediction 153 171 - -
Aip03g03263 229 ProSitePatterns Protein kinases ATP-binding region signature. 27 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03263 Aip-Chr3 106729533 106731585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03263 7 112 Receptor kinase-like Gene Family AT5G45780 79.245 3.97e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip03g03263 PK_Tyr_Ser-Thr 6.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03263 - - aip:107630828 206.838