Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03252 ATGGAGTCCTATGGTGGGATGGGCAAGGCAAAAGGTTTGTCTCCGGATGGAAGTGAAAATGAGTTATGCCTTTCAAACAACGACGTTGTTGACGAGGATGACTTAAGAAAGGTTAAGTTTTTGTCAGATGAAGATGGTCGTGAATATGGAGACGTGACTGGGTTGAGTGCAGAGGATATAATGAAAAAGGTGTTTCGAAGTGAAGAGCGTGCATATGAGTTTTATTGTTGGGTAGGAAAATGCAACGGATTTGGGGTTCGTAAAGGAGACTATGCAAAGGATGAAGATGGGACTGTAGTGAGAATGAGGTTCTTCTGTAATAGGGCTGGCCTAAGGGATGGAAAACACTACAACAGACTAGACAGGAAGAGATTCCATAGGCCTGAGACACGCACGAATTGCCAGGCCCTGATGTCTGTATACCTTGATAAGGGTATCTCGGTTTGGAAGGTTCGAAAAGTAACCCTCGAGCATAACCACGAATTGATACCGAGGGGAATGGTTCACATGATCCGAAGTTTCTGGGTGATATTGGGTTCCGCAAAGGCCCACATCGATGGAATGCATGCGTATAGGTTGCCGACGTCTAAGATACTGGGGTACATGGCTGGGATTGTGGGTGGTTATTCTTCTTTGGGTTTTACCAAGAAAGACGCATAA 660 0.453 MESYGGMGKAKGLSPDGSENELCLSNNDVVDEDDLRKVKFLSDEDGREYGDVTGLSAEDIMKKVFRSEERAYEFYCWVGKCNGFGVRKGDYAKDEDGTVVRMRFFCNRAGLRDGKHYNRLDRKRFHRPETRTNCQALMSVYLDKGISVWKVRKVTLEHNHELIPRGMVHMIRSFWVILGSAKAHIDGMHAYRLPTSKILGYMAGIVGGYSSLGFTKKDA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03252 219 Pfam FAR1 DNA-binding domain 73 163 IPR004330 -
Aip03g03252 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 37 174 - -
Aip03g03252 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 37 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03252 Aip-Chr3 106053920 106054579 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g03252 FAR1 7e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03252 - - aip:107633916 387.882