Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03243 ATGCAGATGAAACTAAAGGAAGTTCGTGTCTTGGTTTACTTGTTTACAGAGACCTCTGTGGGATTAACTGTTGTGGTGCTAATCATACATACTTTCTTCCTAATATCATATGAAGGGTCCCGTATATATTGGAGAAAGCTTGTGAAACAAGTTTTCGAGATGGATCATATGAGAAGAGCAATGTTGGAGAAAGCTTTTAATCTCTTAGATACTCATAGTACTGGATATCTTAACAAAGATCAATGCATTAAGCTCTTTGAGGAGTTGAACAAATACAGGACTTTACCAAAGATCACCAAGGAAGAATTTGAGTTAATATTTGATGAGCTCGATGATAGTCGTGATGTAAAGCTCAATAAGGATGACTTTGCTGATATTTGCCATGCCATTGCTTTAAAATTCCAGAAGGAGAATTCTAGACCCATCTTTGGATACCTAGTCTCTTTTCTTCTCGTACTCAATCTAGTTGCTGTTATTATTGAGACAACGCTTGATATACAAAATAATTCTGGTCAAAAGGTGTGGCAAGTGGTTGAGTTTATTTTTGCTGCGATGCTACTCTCTCAACGATCGCTACCCTCCGGCGACCTTGATGGTCCCCTAGTGTTGCTCTTGGTGATCAACAGTTTCTATGCAGACCACCGCCCCATGTCTCCTTCTCCAATACAATGCCCCAAGGAGAACGCGCCGCTGGAACTGGCTCGTCACCTTTCGATACCTGTTTGA 726 0.4063 MQMKLKEVRVLVYLFTETSVGLTVVVLIIHTFFLISYEGSRIYWRKLVKQVFEMDHMRRAMLEKAFNLLDTHSTGYLNKDQCIKLFEELNKYRTLPKITKEEFELIFDELDDSRDVKLNKDDFADICHAIALKFQKENSRPIFGYLVSFLLVLNLVAVIIETTLDIQNNSGQKVWQVVEFIFAAMLLSQRSLPSGDLDGPLVLLLVINSFYADHRPMSPSPIQCPKENAPLELARHLSIPV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03243 241 Gene3D - 33 147 - -
Aip03g03243 241 PANTHER BNACNNG16060D PROTEIN 28 140 - -
Aip03g03243 241 PANTHER BNACNNG16060D PROTEIN 141 186 - -
Aip03g03243 241 ProSiteProfiles EF-hand calcium-binding domain profile. 98 133 IPR002048 GO:0005509
Aip03g03243 241 Pfam EF-hand domain pair 62 126 IPR002048 GO:0005509
Aip03g03243 241 SUPERFAMILY EF-hand 36 130 IPR011992 -
Aip03g03243 241 ProSiteProfiles EF-hand calcium-binding domain profile. 57 92 IPR002048 GO:0005509
Aip03g03243 241 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 28 140 IPR044581 GO:0005245
Aip03g03243 241 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 141 186 IPR044581 GO:0005245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03243 Aip-Chr3 105718257 105724438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03243 46 192 Ion Channels AT4G03560 52.047 1.75e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03243 K16900 - ahf:112742322 241.121