Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03224 ATGATTTCGTACTATGAACTATCACAGGCAACTAATGGATTTGATGAGAGTAATTTGCTTGGTAGGGGCAGTTTTGGCTCTGTGTTCAAAGGTTTACTTTCAAATGGGATGGTGGTTGCTGTCAAAGTGTTTAACTTGGACTTGGAATTAGGATCAAAGAGCTTCAGTGTAGAATGCGAAGCAATGCGCAATCTGCGCCATCGAAATCTCATGAAGATCATAGGTTGTTGTTCAAGTATAGATTACAAGCTTTTAGTGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAAATGTGGCATCTGCATTAGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTCATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATGGTTGGCCATGTCAGTGACTTTGGCATTGCCAAATTGCTTGGCGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACCGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACAGTTTTGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTGTCACGAGCAATTGATCGAGTTGTGGATTCCTATGCTTGA 732 0.403 MISYYELSQATNGFDESNLLGRGSFGSVFKGLLSNGMVVAVKVFNLDLELGSKSFSVECEAMRNLRHRNLMKIIGCCSSIDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMINVASALEYLHHGSSPIVVHCDVKPCNVLLDEDMVGHVSDFGIAKLLGEGQSKEYTKTMATVGYIAPEFGSKGIISTKGDVYSFGIMLMETFTRKKPTDDLFVAGLSMKGWISESLSRAIDRVVDSYA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03224 243 PANTHER RECEPTOR-LIKE PROTEIN 55 2 241 - -
Aip03g03224 243 ProSitePatterns Protein kinases ATP-binding region signature. 20 42 IPR017441 GO:0005524
Aip03g03224 243 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Aip03g03224 243 Gene3D Transferase(Phosphotransferase) domain 1 90 242 - -
Aip03g03224 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Aip03g03224 243 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 2 241 - -
Aip03g03224 243 SMART serkin_6 14 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03224 243 SUPERFAMILY Protein kinase-like (PK-like) 2 218 IPR011009 -
Aip03g03224 243 Pfam Protein kinase domain 15 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03224 243 PIRSF ILK 2 224 - -
Aip03g03224 243 ProSiteProfiles Protein kinase domain profile. 14 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03224 Aip-Chr3 105277555 105278605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03224 2 240 Receptor kinase-like Gene Family AT3G47570 46.923 3.46e-70 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip03g03224 Pkinase 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03224 - K04733 aip:107633486 489.96