Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03222 ATGGCTAATAACTTTCTCGCGTTAGCTTGCGTGTGCAACGATGGAGGCTCGAGTTCCGGCCACCTTTCGCCGCGACCACGCTACCCTTCTATGCCGAGGTATCCAAAGGGCGTCTCGGCGGCAGAAGGGAGCAGCATGGACACTATGGTCTTGGCAAAAGCCTATTTCTGCGTCACTGGAATGACTTGCTCCGCCTGTGCCGGCTCCGTCGAAAAATCCATCAAACGCCTTCCGGGTATTCGTGAGGCCGTCGTAGATGTTCTTAACAACCGTGCTCAGGTCCTCTTCTACCCCACTTTCGTTAACGAGGAGACCATTCGGGAGGCCATTGAAGATGCTGGTTTTGAAGCCACCTTAGACAGAGACGAATCCAATGAGAGAAATGTTCAGGTATGCCGGATGCGCATCAAAGGAATGACTTGCACCTCTTGTTCCTCCACCGTTGAATCTGCTCTTCAAGCTATTCAAGGTGTGCTCAAGGCTCAGGTGGCTTTAGCGACCGAAGAAGCCGAAGTTCACTACGATCCGAACCTCATTAGCTACAATCAAATCTTGGTGGCCACAGAAGACACTGGTTTTGAGGCCACACTCATCAGCACCGGTGAAGACATGAGCAAGATATACCTTCAAGTTGAAGGTGTAAGAACTGAGCGTTCCATGAGACTCATTGAAAACTCTCTTCAGGCACTCCCTGGAGTACAAGGCATAGAAATACACCCTGAGTTCAACAAAGTATCTCTTTCTTATAAACCGGATTTAACAGGGCCAAGGAATTTCATCAATGTCATTGAGGAAACCGGCTCGAGGCGTTTCAAGGCTAAAATATTCCCTGAAGAAGGAGGAAGAAGGAACACTCACAGAAAAGAAGAAATCAAGCAATACTATAGATCATTTCTATGGAGTTTACTGTTTACTATTCCTGTTTTTTTAACTTCTATGGTGCTTATGTATATCCCTGGAACTAAGCATGGACTGGATTCAAAGGTTGTCAATATGCTTACTGTGGGGGAGATCATAAGATGGGTTCTTTCCACACCAGTGCAGTTCATTATAGGCCGGAGATTTTACTCTGGCGCATACAAAGCGTTGCGCCATGGCTCTGCTAACATGGATGTTTTGATTGCCTTGGGAACAAATGCAGCATACTTCTATTCAGTATATTCTGTTCTTAGAGCTGCTACCTCTCACAGTTTCAAAGGAACTGATTTCTTTGAGACCAGCGCTATGCTTATTTCATTTATTCTGTTGGGAAAGTATCTTGAAGTTCTGGCCAAGGGGAAGACATCCAATGCAATTGCCAAGCTGATGAACTTGACTCCTGACACAGCAATCTTGTTGTCACTTGACAGTGAAGGGAATGTTATTGGTGAACAAGAGATTGATAGCCGGTTGATTCAAAAGAATGATGTGATTAAGATTATTCCTGGAGCAAAAGTAGCTTCAGATGGATTTGTCATATGGGGTCAGAGCCATGTGAATGAGAGCATGATCACAGGCGAGGCGCGTCCTGTTTCAAAGAGAAAGGGTGATACTGTTATTGGAGGGACGGTGAATGAGAATGGGGTGCTGCATATTAAGGCCACCAGGGTTGGCTCAGAGAGTGCTCTTTCTCAGATTGTTCGACTAGTCGAATCGGCTCAAATGGCCAAGGCTCCGGTGCAGAAGTTTGCTGACCGCATTTCCAAATACTTTGTGCCTTTGGTCATTTTGATCTCGTTTTCAACTTGGCTTTCTTGGTTTCTAGCTGGAAGATTTCATGCTTACCCAGAGTCTTGGATACCATCTTCAATGGACAGCTTTGAGCTTGCTTTGCAGTTTGGGATTTCAGTCATGGTCATAGCCTGCCCATGTGCCTTAGGATTAGCAACACCAACTGCTGTTATGGTTGGCACTGGAGTTGGTGCATCTCAAGGTGTGCTGATCAAAGGAGGACAGGCATTAGAAAGCGCTCACAAGGTGAACTGCATTGTTTTTGACAAGACAGGTACCCTTACTATTGGAAAGCCTGTGGTGGTAAATACAAAACTTTTGACAAATATGGTACTACAAGAATTCTATGAACTTGTGGCTGCTGCTGAGGTGAATAGTGAGCATCCACTGGCTAAGGCCATAGTTGAGTATGCCAAGAAACTGAGAGATGAAGAGAATCCTGTTTGGCCAGAAGCAAGGGATTTTGTCTCCATTACTGGACATGGAGTGAAGGCCACTGTTCGGAACAAGGAAGTAATAGTGGGAAACAAGAACTTGATGGTTGAACACAATGTTGTAGTTCCTGCAGATGCTGAAGATATACTAGCAGAAGCTGAAGAGATGGCTCAAACTGGGATTTTAGTATCTATAAGTGGGGAAGTAGTTGGAGTTTTAGCAATATCTGATCCACTGAAACCCAGCGCACAAGAAGTCATTTCCATTCTCAAGTCCATGAACATAAGGAGCATCATGGTGACTGGGGACAACTGGGGTACTGCAAATTCTATAGCAAAGGAAGTTGGAATTGAAACTGTTAATGCTGAGGCCAAACCAGAGCAAAAGGCAGAGAAAGTCAAGGACTTGCAGGCTTCTGGATGCATAGTGGCTATGGTGGGGGATGGTATAAATGACTCACCAGCACTTGTAGCAGCAGATGTAGGAGTGGCAATTGGTGCTGGAACTGATATTGCCATTGAGGCTGCTGATATTGTCTTGATGAAGAGCAACTTGGAGGATGTGATAACTGCCATTGACCTTTCTAGGAAAACATTTTGGCGTATCAGACTCAATTACATTTGGGCCTTGGGATATAATCTTCTTGGAATCCCAATTGCTGCTGGAGCTCTTTTCCCTTCTACAGGATTTCGGTTGCCACCATGGATTGCCGGGGCTGCTATGGCCGCCTCTTCAGTCAGCGTTGTTTGTTGTTCTCTACTATTGAAATATTACAGGAGACCCAAGAAGCTGGACAACCTTGAGATAAGGGGCATAAGCATTGAATGA 2973 0.4538 MANNFLALACVCNDGGSSSGHLSPRPRYPSMPRYPKGVSAAEGSSMDTMVLAKAYFCVTGMTCSACAGSVEKSIKRLPGIREAVVDVLNNRAQVLFYPTFVNEETIREAIEDAGFEATLDRDESNERNVQVCRMRIKGMTCTSCSSTVESALQAIQGVLKAQVALATEEAEVHYDPNLISYNQILVATEDTGFEATLISTGEDMSKIYLQVEGVRTERSMRLIENSLQALPGVQGIEIHPEFNKVSLSYKPDLTGPRNFINVIEETGSRRFKAKIFPEEGGRRNTHRKEEIKQYYRSFLWSLLFTIPVFLTSMVLMYIPGTKHGLDSKVVNMLTVGEIIRWVLSTPVQFIIGRRFYSGAYKALRHGSANMDVLIALGTNAAYFYSVYSVLRAATSHSFKGTDFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLTPDTAILLSLDSEGNVIGEQEIDSRLIQKNDVIKIIPGAKVASDGFVIWGQSHVNESMITGEARPVSKRKGDTVIGGTVNENGVLHIKATRVGSESALSQIVRLVESAQMAKAPVQKFADRISKYFVPLVILISFSTWLSWFLAGRFHAYPESWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVVVNTKLLTNMVLQEFYELVAAAEVNSEHPLAKAIVEYAKKLRDEENPVWPEARDFVSITGHGVKATVRNKEVIVGNKNLMVEHNVVVPADAEDILAEAEEMAQTGILVSISGEVVGVLAISDPLKPSAQEVISILKSMNIRSIMVTGDNWGTANSIAKEVGIETVNAEAKPEQKAEKVKDLQASGCIVAMVGDGINDSPALVAADVGVAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFWRIRLNYIWALGYNLLGIPIAAGALFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPKKLDNLEIRGISIE 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03222 990 PRINTS Copper-transporting ATPase 1 signature 53 78 - -
Aip03g03222 990 PRINTS Copper-transporting ATPase 1 signature 79 102 - -
Aip03g03222 990 PRINTS Copper-transporting ATPase 1 signature 108 128 - -
Aip03g03222 990 PRINTS Copper-transporting ATPase 1 signature 154 175 - -
Aip03g03222 990 ProSiteProfiles Heavy-metal-associated domain profile. 131 197 IPR006121 GO:0046872
Aip03g03222 990 Pfam Heavy-metal-associated domain 58 116 IPR006121 GO:0046872
Aip03g03222 990 Pfam Heavy-metal-associated domain 134 194 IPR006121 GO:0046872
Aip03g03222 990 ProSiteProfiles Heavy-metal-associated domain profile. 206 267 IPR006121 GO:0046872
Aip03g03222 990 TIGRFAM TIGR00003: copper ion binding protein 54 117 IPR006122 GO:0005507
Aip03g03222 990 TIGRFAM TIGR00003: copper ion binding protein 134 195 IPR006122 GO:0005507
Aip03g03222 990 MobiDBLite consensus disorder prediction 16 40 - -
Aip03g03222 990 Gene3D - 49 120 - -
Aip03g03222 990 SUPERFAMILY HMA, heavy metal-associated domain 200 268 IPR036163 GO:0046872
Aip03g03222 990 Gene3D - 664 741 IPR023299 GO:0000166
Aip03g03222 990 Gene3D - 742 792 IPR023299 GO:0000166
Aip03g03222 990 Pfam haloacid dehalogenase-like hydrolase 653 875 - -
Aip03g03222 990 PANTHER ATP7, ISOFORM B 6 981 - -
Aip03g03222 990 Pfam E1-E2 ATPase 456 635 - -
Aip03g03222 990 PRINTS P-type cation-transporting ATPase superfamily signature 493 507 - -
Aip03g03222 990 PRINTS P-type cation-transporting ATPase superfamily signature 657 671 - -
Aip03g03222 990 PRINTS P-type cation-transporting ATPase superfamily signature 786 797 - -
Aip03g03222 990 PRINTS P-type cation-transporting ATPase superfamily signature 808 818 - -
Aip03g03222 990 PRINTS P-type cation-transporting ATPase superfamily signature 861 880 - -
Aip03g03222 990 PRINTS P-type cation-transporting ATPase superfamily signature 884 896 - -
Aip03g03222 990 CDD HMA 134 196 IPR006121 GO:0046872
Aip03g03222 990 SUPERFAMILY HAD-like 656 967 IPR036412 -
Aip03g03222 990 CDD HMA 58 118 IPR006121 GO:0046872
Aip03g03222 990 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 6 981 - -
Aip03g03222 990 Gene3D - 624 918 IPR023214 -
Aip03g03222 990 ProSiteProfiles Heavy-metal-associated domain profile. 53 119 IPR006121 GO:0046872
Aip03g03222 990 ProSitePatterns Heavy-metal-associated domain. 58 87 IPR017969 GO:0046872
Aip03g03222 990 SFLD C1.7: P-type atpase like 639 913 - -
Aip03g03222 990 ProSitePatterns Heavy-metal-associated domain. 136 165 IPR017969 GO:0046872
Aip03g03222 990 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 370 970 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aip03g03222 990 Gene3D - 129 202 - -
Aip03g03222 990 Gene3D - 205 267 - -
Aip03g03222 990 SUPERFAMILY Calcium ATPase, transmembrane domain M 402 935 IPR023298 -
Aip03g03222 990 CDD P-type_ATPase_Cu-like 296 971 - -
Aip03g03222 990 SUPERFAMILY Calcium ATPase, transduction domain A 457 543 IPR008250 -
Aip03g03222 990 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 410 944 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip03g03222 990 SUPERFAMILY HMA, heavy metal-associated domain 53 121 IPR036163 GO:0046872
Aip03g03222 990 ProSitePatterns E1-E2 ATPases phosphorylation site. 659 665 IPR018303 -
Aip03g03222 990 CDD HMA 223 267 IPR006121 GO:0046872
Aip03g03222 990 Gene3D - 425 547 - -
Aip03g03222 990 SFLD p-type atpase 639 913 IPR044492 -
Aip03g03222 990 SUPERFAMILY HMA, heavy metal-associated domain 128 201 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03222 Aip-Chr3 105101358 105106672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03222 51 990 Primary Pumps ATPases AT1G63440 79.237 0.0 1541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03222 K17686 - gmx:100810141 1681.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03222 03 105101358 105106672 Aip03g03222 03 105101358 105106672 ECH