Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03212 ATGGGCTGTGAAATATCGAAAGCATGCTGCTGGGGCGCCCGAGATGATCAAGTTCCAGAGGCACAAATTGTTCAAAATGAAGATAGAATTGAGGGCAGTGACTTGCCGCAGTTTCGAGAGTACACAATTGATCAGCTCAGGAAGGCTACATCCGGATTTGCAGTAGAAAATATAGTTTCTGAGCATGGAGAAAAGGCACCAAATGTGGTCTATAAAGGGAAACTTGAAAACCAAATGCGAATAGCTGTCAAACGGTTCAACAAATTAGCCTGGCCAGATGCACAGCAATTTATGGGGGAGGCCAGAGCTGTAGGTCAGCTAAGGAACCATAGATTGGTAAATCTCCTTGGATGTTGCTGTGACGGTGATGAAAGGTTGCTTGTCGCAGAATTTATGCCCAATGAGACTTTGGCAAAGCACTTGTTTCATTGGGAAACTCAGCCGATGAAATGGGCAATGCGACTGAGAGTTGCCTTTCACCTTGCCCAAGCTTTGGAGTACTGTACCAGCAGGGGACGTGCACTATATCATGACCTAAATGCTTACAGAGTTCTTTTTGATGATGAATACAATCCTAAACTTTCATGCTTTGGTCTGATGAAAAACAGTCGAGATGGGAAAAGTTATAGTACGAATTTGGCATTTACGCCGCCTGAGTATCTGAGGACAGGTAGAGTTACTCCAGAGAGTGTAACTTATAGCTTTGGGACCCTTTTACTTGACCTTCTTAGTGGAAAACATATTCCTCCAAGCCATGCTCTTGATCTGATTAGGGACCGGAATGTTACGACACTAACAGACTCTTGTCTAGTTTCTTCTCTTGCGCTGATGGGCATACCAGATGGTGCTGCTGCCTTTCCCCTTACTCCACTTGGTGAAGCATGTCAGCGAATGGATCTGACTGCCATACATGAGGTGTTGGAGAAACTTGGGTATAAAGATGACGAGGGTGCAGCAACTGAGGTATAG 969 0.4499 MGCEISKACCWGARDDQVPEAQIVQNEDRIEGSDLPQFREYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNKLAWPDAQQFMGEARAVGQLRNHRLVNLLGCCCDGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAFHLAQALEYCTSRGRALYHDLNAYRVLFDDEYNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNVTTLTDSCLVSSLALMGIPDGAAAFPLTPLGEACQRMDLTAIHEVLEKLGYKDDEGAATEV 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03212 322 Gene3D Phosphorylase Kinase; domain 1 27 131 - -
Aip03g03212 322 Pfam Protein tyrosine and serine/threonine kinase 69 247 IPR001245 GO:0004672|GO:0006468
Aip03g03212 322 ProSiteProfiles Protein kinase domain profile. 56 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03212 322 SUPERFAMILY Protein kinase-like (PK-like) 34 267 IPR011009 -
Aip03g03212 322 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 274 IPR045845 GO:0004672|GO:0009742
Aip03g03212 322 PANTHER TPR DOMAIN KINASE 271 322 - -
Aip03g03212 322 PANTHER TPR DOMAIN KINASE 1 274 - -
Aip03g03212 322 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 271 322 IPR045845 GO:0004672|GO:0009742
Aip03g03212 322 Gene3D Transferase(Phosphotransferase) domain 1 133 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03212 Aip-Chr3 104807334 104810846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03212 41 246 Trihelix Transcription Factor Family AT4G32710 34.862 3.73e-36 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Aip03g03212 PK_Tyr_Ser-Thr 1.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03212 K14500 - tcc:18606516 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03212 03 104807334 104810846 Aip03g03212 03 104807334 104810846 ECH