Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03189 ATGGAAAACAGGGAGGAAGATGTGAAGGTAGGAGCAAGCAAGTTCAGAGAGAGGCAGGCAATAGGGACAGCAGCACAAACAGAGAGAGACTACAAGGAGGCACCAGCAGCACCATTGTTTGAGGCAGGTGAGCTCAAGTCATGGTCGTTCTACAGAGCAGGCATTGCTGAGTTTGTGGCCACTTTCTTGTTCCTCTACATCACGGTCTTGACTGTAATGGGTGTCAAGAGGGAGCCCTCCATGTGCTCCTCTGTTGGAATCCAGGGTATTGCTTGGGCCTTTGGTGGCATGATCTTCGCCCTTGTCTACTGCACTGCTGGAATCTCAGGTGGACACATAAACCCAGCAGTCACCTTTGGACTCTTTTTGGCAAGGAAGTTGTCCCTCACAAGGGCAATATTCTACATAGTCATGCAGTGTCTTGGAGCTATATGTGGTGCTGGTGTAGTGAAGGGATTTGAGGGTAATGCTCGCTATGAGATTTTAAAAGGAGGAGCCAATATGGTCAACCATGGTTACACCAAGGGTGATGGCCTTGGAGCTGAGATTGTTGGCACCTTCGTCCTTGTCTACACCGTTTTCTCTGCTACTGATGCCAAGAGAAACGCTAGGGACTCTCATGTCCCTGTTTTGGCCCCTCTCCCCATTGGCTTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCAAGGAGTCTCGGAGCTGCCATTATCTACAACAGGGACGAAGCGTGGGATGACCATTGGGTTTTCTGGGTTGGACCTTTCATAGGAGCTGCTCTTGCTGCCGTGTATCACCAGATAGTGATCCGAGCCATTCCGTTCAAGACAAGGGCTTAA 864 0.5023 MENREEDVKVGASKFRERQAIGTAAQTERDYKEAPAAPLFEAGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVKREPSMCSSVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFEGNARYEILKGGANMVNHGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPVLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDEAWDDHWVFWVGPFIGAALAAVYHQIVIRAIPFKTRA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03189 287 SUPERFAMILY Aquaporin-like 44 279 IPR023271 -
Aip03g03189 287 PANTHER AQUAPORIN PIP1-5-RELATED 1 286 - -
Aip03g03189 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 286 IPR034294 -
Aip03g03189 287 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Aip03g03189 287 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g03189 287 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g03189 287 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g03189 287 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g03189 287 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g03189 287 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g03189 287 TIGRFAM MIP: MIP family channel proteins 56 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g03189 287 Gene3D Glycerol uptake facilitator protein. 37 285 IPR023271 -
Aip03g03189 287 CDD MIP 52 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aip03g03189 287 Pfam Major intrinsic protein 44 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03189 Aip-Chr3 103428715 103430163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03189 1 286 Major Intrinsic Protein MIP AT4G23400 86.760 4.54e-179 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03189 K09872 - gmx:100796833 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03189 03 103428715 103430163 Aip03g03189 03 103428715 103430163 ECH