Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03185 ATGCCGATATGGTGGGTGAAGTCTAAAGAGGTGAAGGAGAGAAAGAAGTCAAAAAGGGAAAGTATTATTGATGCAATACAGCAAAAATTTAAGAATGCTTCTGAAAAGATGCGCAATGACAAATCCAAAGGATCTAGAAGACATGTTATTGGCACCAGGTCAGAGAAGCAATCCCAATCTGTTGTAGCTTCAAGAATATCATCACCCTCCTCCACATATGTGTCCCGCTGTCGAAGTTTTTCAGAATTAGAAAGGCCTCTATTTCAGCAGCTCCCACTGTCAGGGTCGCACCTTCCTGCTGTCAGTGACGCAAATTCTGGAATTTGTTTACCATCAAGAATGGAAAGAGCTAGTGGTTCTAAGCAATCTCTGTATTGTCCCCTACCGGCATCTGGTGTTGTTTCCAACAGGGGATATCCTACTGATGCTGAGGGATATATAGATACCGCATCTGTTTCAAGTGATAGCTCTGGTTATAGTGGTGACTCATCTGATTCACATCTCATTAGTCATCTGGCAACCGACTATGAAATTGGAAACAGGGCCACCATTAACAGGTCTTTCAGGTTGGTGCACAGGAACAGATCACCTGTTACTTTCCAGAATGACTTAGGAGCATCCTCAAGCCCAGCTCCTCAAATGTGCGGCGTTAAGAATCCATCTACTTCACCAAAACGGAGTCGTTTGCATTTGCCCAATCTAAAAATAGGCCGTACCTGTGGTCTATTCAGTGCTCAAGAAAGGTCAACATCAAGTCCTTCTAAAAGTCCAGTGAGAGCACTTGGCCCTGACCAGCTATTTAACTCTGCACTATGGACAGGAAAGCCTTGTCCATATGCAGCATCAGGGAACTACTCTAGTCCTGGTTCAGGCCAAAACTCAGATGTTGGGGATCTGCCAGGACAGGTAATTTTGCCTCTTAACAGGTACAGCCCTGAGTGTTCTCCTATACCTAGTCCGAGAATGACAAGCCATGGTCCCCGTTCCAGAATACAGGGTGGTGCTGTCACACCTCTTCATCCACGAGCTGGCACCTTCCCTTTGGAAATAACTACAAGACATCCTGATGATGTTACTCAAAAAACTCATCCTTTACCGCTTCCTCCAATAACAGTCACCAGTTATTGTCTTTCTCCAAACTATTCTTCATCTACAACTCCATCAGCTCCTCGCAGTCCTGCCAGAGCAGAGATCCAAACAAGCCAAGTTTCACGCTGGAAAAAGGGGAAGTTGCTCGGAAGGGGGACATTTGGACATGTTTATCTTGGTTTTGACAGTGAAAGTGGTGAGATGTGTGCGATGAAGGAGGTAACGCTTTTTGCAGATGATGATAAATCAAGGGAATGCGCACAGCAACTTCAACAAGAAATTATGCTTCTAAGTCAGTTGCAGCATCCAAATATAGTCCGATATTATGGTTCTGAAACGGTAGAGGACAAACTTTACATATACTTGGAGTATGTCTCCGCCGGGTCTATTTACAAACTGCTTCGAGAGTATGGCCAGTTAGGTGAAAATGCCATTCGTAATTATACTCGGCAAATTCTATTAGGACTTGCGTATTTGCATGCTAAGAACACTGTCCACCGGGACATTAAGGGAGCCAATATACTAGTGGACCCTAATGGACAGATAAAATTGGCAGATTTTGGGATGGCAAAGCATATAACTGGGGAGTCTTGTCCATTTTCATTCAAAGGAAGTCCTCACTGGATGGCACCTGAGGTTGTACATAATTCAAATGATTGTAATCTTGCTGTTGATATATGGAGTCTTGGCTGCACTGTTCTGGAGATGGCTACGACAAAACCACCTTGGAGCCAGTTTGAGGGGGTGGCTGCTATATTTAAGATTTTACAGATGAAGAAACTGCCTGAAGCACCAGAACATCTATCAGAAGATGGAAAAGACTTTGTGAGGCTTTGTCTGCAAAGAAATCCCCAGGACCGCCCATCGGCTGTGCAACTTCTAGAGCATCCATTTGTCAAAAAGGCTACACTAGAAAGAACCATTCTGACTGTACATCCTTCAGAAGCATCACCAGCTATTGTAGATGAACTGAAATCTCTGGCCATTGGACCTGCAAAACATAATTTGTGCTTAGAGTCAGAAATGGCTGCTGGTACCAGTCGGCCAAGAAGGTTGAGAATCGGCTCTGCATCAAGCGATGTGCATACACCAAGGAACATGTCATGCCCCGTTTCTCCCCTTGGACAGCGAACTTTGCCTTTGGGAACATTTGATGTGGCTGGAAGAGTGTCTACAGTTCCAGTAGTTAGTCCTCGTACCACATCTGGCCTATCCACACCATTCAATGATAGTGGTCGTACAATCTCGTTTCATAGAAACAAGCAGCCGATGTTCTCACATGAAACTGCATGTCTGATGCCAAGGTCTCAAGGTGGGTTTCATTATCAGGATCCTACACATGATGCCCTTCGAGTAACCAGACCTTCTCAGGATGTAATAATTTCATCTGATGATGATGTTCTTGCAACCAATTATAAGAGGGTTGTCCGAAGAGAATTTTATAATGTGCCTCAAACGCCCACGAGGGATTGTGTTAGGATGAGTACTTACTTAGATTGCCGAGCCAGTACTCCCAGGCAAGGCCCGACAACACAAATGGCATGTCACCTGCACGTCAGTGACCTGAGGGGACACCGTGCATGTGAATAA 2679 0.4479 MPIWWVKSKEVKERKKSKRESIIDAIQQKFKNASEKMRNDKSKGSRRHVIGTRSEKQSQSVVASRISSPSSTYVSRCRSFSELERPLFQQLPLSGSHLPAVSDANSGICLPSRMERASGSKQSLYCPLPASGVVSNRGYPTDAEGYIDTASVSSDSSGYSGDSSDSHLISHLATDYEIGNRATINRSFRLVHRNRSPVTFQNDLGASSSPAPQMCGVKNPSTSPKRSRLHLPNLKIGRTCGLFSAQERSTSSPSKSPVRALGPDQLFNSALWTGKPCPYAASGNYSSPGSGQNSDVGDLPGQVILPLNRYSPECSPIPSPRMTSHGPRSRIQGGAVTPLHPRAGTFPLEITTRHPDDVTQKTHPLPLPPITVTSYCLSPNYSSSTTPSAPRSPARAEIQTSQVSRWKKGKLLGRGTFGHVYLGFDSESGEMCAMKEVTLFADDDKSRECAQQLQQEIMLLSQLQHPNIVRYYGSETVEDKLYIYLEYVSAGSIYKLLREYGQLGENAIRNYTRQILLGLAYLHAKNTVHRDIKGANILVDPNGQIKLADFGMAKHITGESCPFSFKGSPHWMAPEVVHNSNDCNLAVDIWSLGCTVLEMATTKPPWSQFEGVAAIFKILQMKKLPEAPEHLSEDGKDFVRLCLQRNPQDRPSAVQLLEHPFVKKATLERTILTVHPSEASPAIVDELKSLAIGPAKHNLCLESEMAAGTSRPRRLRIGSASSDVHTPRNMSCPVSPLGQRTLPLGTFDVAGRVSTVPVVSPRTTSGLSTPFNDSGRTISFHRNKQPMFSHETACLMPRSQGGFHYQDPTHDALRVTRPSQDVIISSDDDVLATNYKRVVRREFYNVPQTPTRDCVRMSTYLDCRASTPRQGPTTQMACHLHVSDLRGHRACE 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03185 892 MobiDBLite consensus disorder prediction 29 53 - -
Aip03g03185 892 MobiDBLite consensus disorder prediction 381 400 - -
Aip03g03185 892 SMART serkin_6 406 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03185 892 Pfam Protein kinase domain 407 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03185 892 ProSitePatterns Protein kinases ATP-binding region signature. 412 435 IPR017441 GO:0005524
Aip03g03185 892 Coils Coil 23 43 - -
Aip03g03185 892 SUPERFAMILY Protein kinase-like (PK-like) 403 663 IPR011009 -
Aip03g03185 892 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 809 - -
Aip03g03185 892 MobiDBLite consensus disorder prediction 312 341 - -
Aip03g03185 892 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 809 - -
Aip03g03185 892 Gene3D Transferase(Phosphotransferase) domain 1 403 688 - -
Aip03g03185 892 MobiDBLite consensus disorder prediction 29 65 - -
Aip03g03185 892 ProSiteProfiles Protein kinase domain profile. 406 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03185 892 CDD STKc_MEKK1_plant 405 662 - -
Aip03g03185 892 MobiDBLite consensus disorder prediction 203 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03185 Aip-Chr3 103138096 103142597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03185 1 791 MAP Kinase Kinase Kinase AT1G63700 53.317 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip03g03185 Pkinase 1.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03185 K20717 - gmx:100814422 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03185 03 103138096 103142597 Aip03g03185 03 103138096 103142597 ECH
Aip03g03185 03 103138096 103142597 Aip10g02360 10 106967395 106971661 PCT