Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03178 ATGGATTCGAGCTTTCAGTTCAGTGGTGGAGAGGATGATTCAGATCGGCTTACTGAAGAAAAGTATTTCGGTATCTCTTCTTCGAGTGGGAATGACGACGACGACTCTTTTGGGGATGACTCCGAGACGGGTGAAATGGGTGATGACGTCCACGAGAATGGCGTTGGCGCAGACCCAGTGACATGTGAGGGTAATGCGCCTGAGTTTAGGTCCGCAGAGGATTTCGTGGACAAGGTGTTTAGTACCGAGCAAAAGGCTTATACAGCATGCAAACAATTTTCCCAGCTAAGGGGGTTCGGTGTAAGGAAGGGTGACGTGGCTCAAATAAATGGTATTTTGGTAAGACGAGACTTTTTTTATCACCGGCAAAGTACAAGGCATGAGAAACACTACGATTATCCAGAAAGAGTACATGATGAGAGGTTCGAGAGTCGCATGGATTGTACCGCAAAGTTGAAAATTTACTATGATTTGCAAGACCAGGTTTGGAAAGTCAAGAGGATAGAGGACAACCATAACCACCCTCTTGCTGCAACTATGTTTAGTCATCTTCTTCCTAGTCATCGAAATCTGAGTGAGAGTGATAAGGCTCAAGTTGATAGTCTCAAAAAGTTCAGGATTGCCACATCGAATATTATGGCTTACATGGTCGGACAGTCAGGGGGATATGGGATACTTTGGTTTACGACAAGGGATCTATATAATTATGTTCACAGCCAAAGAATAGCTCAAATAAACGACGGAGACGCAGCAGCAACGATAAGTTATTTGGAGGGCAAGGTCAACGCTGACATGATGTTAGTCGCCAAATATACCAAAACAGCAGACGATCGACTTGGTAGCCTATTATGGGCTGATGGGCAGATGATGGCTGATTACCAGTTGTTCGGTGACGTGCTTGCATTTGATGCAACATACTGGTCCAACAAGTACAAGAAGCCTTTAATAGTCTTTTCCGAATCAAATCACCACAAGCAGACGACGATATTCGGGTTTGCATTGCTGGAGGACGAGGAGGTCCGTACATATAGGTGGGTTTTGTGTAATATTCTGGATGTCATGGATAATAAGACGCCTTATGTTGTGGTCATTGATGGGGATAAAGCTATGCGAGCAGCAATTGCGGAAGTGCTACCTTCAGCCAAGCATCGCCTATGCGCCTAA 1164 0.4502 MDSSFQFSGGEDDSDRLTEEKYFGISSSSGNDDDDSFGDDSETGEMGDDVHENGVGADPVTCEGNAPEFRSAEDFVDKVFSTEQKAYTACKQFSQLRGFGVRKGDVAQINGILVRRDFFYHRQSTRHEKHYDYPERVHDERFESRMDCTAKLKIYYDLQDQVWKVKRIEDNHNHPLAATMFSHLLPSHRNLSESDKAQVDSLKKFRIATSNIMAYMVGQSGGYGILWFTTRDLYNYVHSQRIAQINDGDAAATISYLEGKVNADMMLVAKYTKTADDRLGSLLWADGQMMADYQLFGDVLAFDATYWSNKYKKPLIVFSESNHHKQTTIFGFALLEDEEVRTYRWVLCNILDVMDNKTPYVVVIDGDKAMRAAIAEVLPSAKHRLCA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03178 387 Pfam MULE transposase domain 299 386 IPR018289 -
Aip03g03178 387 MobiDBLite consensus disorder prediction 1 63 - -
Aip03g03178 387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 386 IPR031052 GO:0006355
Aip03g03178 387 PANTHER OS02G0262500 PROTEIN 73 386 - -
Aip03g03178 387 Pfam FAR1 DNA-binding domain 91 177 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03178 Aip-Chr3 102614674 102615837 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g03178 MULE 5.8e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03178 - - aip:107633461 760.37