Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03174 ATGAAAACGGTGAATCAATCTATTCTGATCTTTGTGCAGGATGCTTATCTCCCTCAACGGCTTTTAGATAAATTGATGTTCATTTATAATTATGTGGAGATGGCTCGAGTAACAGGTGTCCCAATTTCTTTTCTGCTTGCTAGAGACCAAAGCATTAAGGTGACTTCTGAAGATGTTCGGAAACTTAATCTCCCTCCAGAATCAGTGAACAAAACTCCATCTGGGGAAACATTTGTTAAATCAAATTTGCAGAAGGCTAGTATTGGAATGGATAACTTGAACGCTTAA 288 0.3785 MKTVNQSILIFVQDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLARDQSIKVTSEDVRKLNLPPESVNKTPSGETFVKSNLQKASIGMDNLNA 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03174 95 Gene3D - 2 75 IPR036397 GO:0003676
Aip03g03174 95 SUPERFAMILY Ribonuclease H-like 12 54 IPR012337 -
Aip03g03174 95 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 12 61 - -
Aip03g03174 95 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 12 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03174 Aip-Chr3 102393105 102393654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03174 54 86 Core DNA Replication Machinery Family AT5G63960 81.818 3.86e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03174 K02327 - pda:103701350 89.3521