Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03158 ATGGACAAGGACAAACCTCTTGTTCATGGTGGAGGTCTTCCACCTCCATCAGGACGTTATTCGGGTTACTCACCCACTGGAAATGCCTTCAATGTAAAATCCGAGCTGTCTTCATCGTCGTCATATCCTCCAATGGTTCCAGGTTCTAGCCCAGACTCCAGTCACTTTGGTCATGGAATGTCCTCAGATTCTAGTGGATTTAGTCACGATATTAGCAGAATGCCCAAAAATCCTCAAAGAAATAGGGGACACAGGCTGAGTAGGAATGAAGAGCAATGCTTAGAGGATCAACTAGGTGATGCAAAGATAGCAGTTGGGAGTGCTGAAACAGAACTGAAACAGTTGAAAAACAAAATTAGCCATTGTGAAAAAGAACTAAAAGAGAAAACTAAACAATTAAGATCAAAGCGTGAAGAAGCTGTTTCTGTAGAAAATGAGCTTGCCGCTAGAAGAAAAGACGTGGAAAATGTTAAGATTGACTTGGAGTCTATTCCATATAAAGGAGAGATGGAAGCTCTGCAAAGGGATCGTGCATCTGAGATAGATTGTGTACAAAAGTGGAAGGATGAAATACGCAATATTTCGGCATACTTGTCAAATGTTGAATTCACGTATTGTGATCCTGTCAAAAAATTTGATAGATCAAAGGTGAAAGGTGTCGTTGCAAAACTCATCAAAGTAAAGGATAAGCCAAGGAACGACAAGGCAACCATCCTCACTGATACGATTCAAATGCTTAAAGATTTAACTGCCAAAGTTAATAGGTTGAAAACCGAGCATAAAGCGCTTTCTGATGAGTCCCGCGAGCTAATGCAAGAGAAGAACGAACTCAGGAAAGAAAAGGCATCTGGTTTTAGATTGCCTGCTTCTCATGTTCATACTGTTGGACCAATCTACAATTCTAATAGTAACTCTGCTGCTTCTCTTTCAAGCGCTTATAGGAATAGTTTGAGGGTTGCAAAGGATAAAAACATTCAGTATATAGCACTCCCAGCTATATCATGTGGTGTCTTTGGGTAA 1020 0.4049 MDKDKPLVHGGGLPPPSGRYSGYSPTGNAFNVKSELSSSSSYPPMVPGSSPDSSHFGHGMSSDSSGFSHDISRMPKNPQRNRGHRLSRNEEQCLEDQLGDAKIAVGSAETELKQLKNKISHCEKELKEKTKQLRSKREEAVSVENELAARRKDVENVKIDLESIPYKGEMEALQRDRASEIDCVQKWKDEIRNISAYLSNVEFTYCDPVKKFDRSKVKGVVAKLIKVKDKPRNDKATILTDTIQMLKDLTAKVNRLKTEHKALSDESRELMQEKNELRKEKASGFRLPASHVHTVGPIYNSNSNSAASLSSAYRNSLRVAKDKNIQYIALPAISCGVFG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03158 339 Coils Coil 239 283 - -
Aip03g03158 339 MobiDBLite consensus disorder prediction 1 88 - -
Aip03g03158 339 ProSiteProfiles Macro domain profile. 223 339 IPR002589 -
Aip03g03158 339 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2-2 85 231 - -
Aip03g03158 339 Pfam Macro domain 261 339 IPR002589 -
Aip03g03158 339 Gene3D Leucine Aminopeptidase, subunit E, domain 1 254 339 IPR043472 -
Aip03g03158 339 Coils Coil 98 146 - -
Aip03g03158 339 MobiDBLite consensus disorder prediction 21 74 - -
Aip03g03158 339 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 85 231 - -
Aip03g03158 339 SUPERFAMILY Macro domain-like 262 339 IPR043472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03158 Aip-Chr3 101736301 101738852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03158 210 283 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 57.895 4.44e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03158 K06674 - gmx:100780995 221.476