Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03145 ATGATCATTCCGGAGAAGAACCGCAAAGAGATCTGCAAATATCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAACCTGGCGAAGCACCCTGAGATTGAGGTGCCAAATCTACAGGTGATTAAGCTGATGCAGAGTTTCAAGTCAAAGGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTATTGGTTTCTCACCAATGATGGCATTGAACACCTCAGAACCTACCTCAATCTTCCTTCGGAAATTGTACCTGCTACTCTAAAGAAACAAGCAAAGGCTCCAGGTCGTCCATTTGGTGGTCCACCTGGTGATCGCCCTAGGGGTCCTCCACGCTTTGAAGGAGAGCGTAGGTTTGGTGACCGTGATGGATACCGTGGAGGTCCCCGTGGTCCTGGTGGTGATTTTGGAGGTGATAAGGGAGGGGCACCTGCAGATTACAAGCCTTCTTTTGGGGGTGCTGGTGGAAGACCAGGCTTTGGCCGAGGTTCTGGCAGTTTTGGTGGGGCACCACCATCTAGCTCAAATCTTCCATGA 546 0.4982 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIEVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKAPGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYKPSFGGAGGRPGFGRGSGSFGGAPPSSSNLP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03145 181 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 180 - -
Aip03g03145 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Aip03g03145 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 180 IPR037447 -
Aip03g03145 181 Gene3D - 1 104 IPR036388 -
Aip03g03145 181 MobiDBLite consensus disorder prediction 112 128 - -
Aip03g03145 181 MobiDBLite consensus disorder prediction 93 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03145 Aip-Chr3 101038022 101040537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03145 1 181 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 76.374 6.99e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03145 K02947 - csin:114270063 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03145 03 101038022 101040537 Aip03g03145 03 101038022 101040537 ECH