Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03126 ATGACTTGGAAGGTCCGTGAAGAATATAGTACTAAATTTGATGGATCTTCTATTTTGAAGGAGACTGACATTGGGAGGCACGTGAATCGGTTGCGGAAGCATTCCTCCAATGACGTTCGCAGATTGGTGAAGCTACTTGTGAGGAAGTGGAAGGAAATTGTGGTTGAGTGGGTGAGGTTGAATCAACCGGGTGGAACAGCCTCTCTCATGGCTGATGGTGACTCTCCACCGCTGAAAACCACCCAAAACGGGCATCATCGGATTCCTGATTTTGCATACTCGCCAAATCCACACAATGAATGGAAGTTCTGGGTCTGA 318 0.4717 MTWKVREEYSTKFDGSSILKETDIGRHVNRLRKHSSNDVRRLVKLLVRKWKEIVVEWVRLNQPGGTASLMADGDSPPLKTTQNGHHRIPDFAYSPNPHNEWKFWV 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03126 105 CDD TFIIS_I 18 54 - -
Aip03g03126 105 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 17 63 IPR035441 -
Aip03g03126 105 Pfam TFIIS helical bundle-like domain 18 54 IPR017923 -
Aip03g03126 105 ProSiteProfiles TFIIS N-terminal domain profile. 1 57 IPR017923 -
Aip03g03126 105 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 15 64 IPR035441 -
Aip03g03126 105 MobiDBLite consensus disorder prediction 66 91 - -
Aip03g03126 105 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 19 100 IPR044790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03126 Aip-Chr3 99570258 99571167 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aip03g03126 Med26 4.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03126 - - aip:107630755 212.616