Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03118 ATGGATGAGCTTGCTTGCTTCATGGACTGGGATCTGGAATCCATTGTGAGAGGGTGCCCATCAACTGCCACCACCATCATGGAGCACGATCCAAACCCTAATTTCCTTTTTCATCAACAAGATTATGACCTACTTTTCAATGATAATAATAATCATCATCCCCTACCGTTACCAATAATCCCCAAAGAACCCGAAGATGCCATCAAACAAAACTTGCAGCAAGTTTCCACAGTTTCTAAACCTAAAAAGAGCAAGAAGAACATGAACAAGAGGGTGGTGAAGGAGGTTACAGCGGCGGATATTGGAGTTTGCGACGCATGGGCGTGGCGAAAATACGGACAGAAACCTATCAAGGGTTCACCATATCCACGGAGCTATTACAGGTGCAGCAGCTCGAAAGGATGCGTGGCGAGGAAACAAGTTGAAAGGAACCATCTGGATCCAACGATTTTCTTGGTTACATACACCGCTGAACACAACCATCCCTACCCTACTCGCCGCAACTCTCTCGCAGGGATTTCACGCAAGAACAACTCCTTAACAACAACTACTACTACTACTACAACTTGTTCTTCTTCTTCGAATTCCTCGTCCATGGAAGAACATAAGGGATTCAAGAAGCAGCATGGACTTCTTTGTGAAGCTGCTGAGTTTGGTGATGTTTGGTTTCCAGACACAACAGACATCGATCATGAATTTATGAGGCTTAATAATAAACAAGAACTTGAATTTCATGCTGATGATTTCATTGCTGGTAATTATTAG 765 0.4353 MDELACFMDWDLESIVRGCPSTATTIMEHDPNPNFLFHQQDYDLLFNDNNNHHPLPLPIIPKEPEDAIKQNLQQVSTVSKPKKSKKNMNKRVVKEVTAADIGVCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCVARKQVERNHLDPTIFLVTYTAEHNHPYPTRRNSLAGISRKNNSLTTTTTTTTTCSSSSNSSSMEEHKGFKKQHGLLCEAAEFGDVWFPDTTDIDHEFMRLNNKQELEFHADDFIAGNY 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03118 254 SMART WRKY_cls 103 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g03118 254 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g03118 254 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 202 IPR044810 GO:0003700
Aip03g03118 254 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 202 - -
Aip03g03118 254 MobiDBLite consensus disorder prediction 182 201 - -
Aip03g03118 254 SUPERFAMILY WRKY DNA-binding domain 104 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g03118 254 Gene3D WRKY domain 85 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g03118 254 ProSiteProfiles WRKY domain profile. 105 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g03118 254 MobiDBLite consensus disorder prediction 182 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03118 Aip-Chr3 99086725 99088037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03118 9 253 WRKY Transcription Factor Family AT4G01250 39.928 8.60e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip03g03118 WRKY 5.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03118 K13426 K13425 gmx:102663255 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03118 03 99086725 99088037 Aip03g03118 03 99086725 99088037 ECH
Aip03g03118 03 99086725 99088037 Aip05g03921 05 147376646 147380070 ECH
Aip05g01096 05 15697225 15697944 Aip03g03118 03 99086725 99088037 PCT