Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03100 ATGGAACAGAAAAGCATTCTGCTATCTGCGATCGGTGTTGGGGTTGGAGTGGGAGTGGGACTTGGATTGGCCTCTGGACAAGGAGTTGGAATATGGGGAGCTACCACATATTCCTCAAACGCCATAACCGCTGAGAAGATAGAACAGGAAATGCTACGACAAGTTGTTGATGGAAGAGAAAGCACTCAGACAAGGGTTTTGCTGACAAGTGCTGCTTATGTCCATTTAAAGCATGCCGAGGTTTCCAAGTATACTCGAAATCTTGCCCCTGCAAGCCAAACTATTCTGCTTTCAGGGCCAGCAGAACTCTATCAACAGATGCTTGCAAAGGCTTTGGCACATTACTTTGAGGCCAAGTTGCTTCTTTTAGATTTAACTGACTTTTCATTGAAGATTCAGAGTAGATATGGCTTTGGAAATCAAGAATCTTCTTTCAAAAGATCCACCTCAGAGTCGACCTTGGAGCGATTATCAGACCTATTTGGCTCATTTTCAATCTTTCAACAGAGGGAGGAACCTAAAGGCAGAATACATAGGCAGAGCAGCGGAGCGGACCTACAATCAATGGGGACTGAAGCATCTTGCAATCCTCCAAAGCTCCGCAGGAACGCTTCTTCGTCGTCAAATATTAGCACCCTTGGTTTGCAAAGCAATCATACAAATCCAGCTCCTCTGAAACGCACAACTAGCTGGTCTTTTGATGAAAAGCTTCTTATACAGTCTCTTTACAAGGTTCTGGTTTTTGTGTCTAAGACCTACCCTATTGTGCTATATCTGCGTGACGTTGATAAGTTGATATATAGATCACAAAGGATATATAACTTGTTCCAAAAGATGTTGAAGAAACTATCTGGACCAATACTGATTCTTGGTTCACAAGTTCTTGATTCTAGTAATGACTATGAAGAGGTAGATGACCGGCTTAACTCACTCTTCCCGTACACCATAGAAGTCAAGCCCCCAGACGATGAATCTCATCTTGTCAGCTGGAAGTCTCAGTTGGAAGAGGATATGAAGAAGATACAAGTTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGACCTTGTTTGTGAAGACCTGGATTCAATCTGTGTTGCTGACACAATGGTTCTCAGTAACTACATAGAAGAGATTATTGTCTCGGCGCTTTCTTACCACTTGATGAAAAGCAAAGACCTTGAATACAGAAATGGGAAACTTGTTATTTCTTGCAATAGTTTATCCCATGCCTTGGGTATATTCCACAAGGGAAAACTCATTGGAAAAAACACATCGAAATTGGAAGATCAAGCTGTTAAATCTGAGGTGCCAAAAGGGGAAGAAAGTGTTACAAACCCAGAAGCAAAGTCTGAAGATGCTGCTCCTGTAAAAAAGCCTGGAGCAGAAGCATCAAAGGAAGAAGGGGAAAAATCAGTTGCATCATCAAAAGCTGCTGAAGTTCCTCCGGATAACGAGTTTGAGAAGCGAATAAGACCCGAGGTGATACCAGCAGATGAGATAGATGTGAAGTTCTCTGATATTGGTGCCTTAGAAGAGACGAAAGAATCCCTCCAAGAACTGGTAATGCTTCCTCTTCGAAGGCCAGACCTCTTCACCGGAGGACTTTTGAAGCCTTGCAGAGGAATATTGCTATTTGGACCTCCAGGCACCGGCAAGACAATGCTGGCTAAGGCCATTGCGAAGGAGGCCGGGGCAAGTTTCATCAATGTGTCCATGTCCACCATCACTTCAAAATGGTTTGGCGAAGACGAGAAGAACGTTCGGGCTTTATTCACGCTTGCAGCCAAGGTGTCCCCCACCATTATATTTGTGGATGAGGTCGATAGCATGCTTGGCCAAAGGACTAGAGTTGGGGAGCACGAAGCCATGCGGAAAATCAAGAATGAATTTATGGCACATTGGGATGGCCTTATGACCAAACCAGGGGAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTCGATGAAGCTATTATTAGGCGATTCGAAAGGAGAATTATGGTGGGGCTGCCATCTGTGGAGAATAGGGAGAAGATTCTGAGGACTTTATTGGCCAAAGAGAAGGTGGATGATGAACTTGACTTTAAGCAACTAGCAACTATGACAGAAGGATACACTGGGAGCGATATAAAGAATCTGTGCACAACTGCTGCATATCGGCCTGTGAGAGAGCTAATTCAGCAAGAGAGGCTCAAGACTCTGGAGCAAAAGCAGAAAGCGGTTACAACACGAGAAGGGAAAGAAGCAAGAGAAGAGAAGCAAGAAAGAGTGATTAGCCTTAGGGCATTGAATATGCAGGACTTGAAGGAGGCAAAGGCTCAGGTTGCTGCAAGCTTTGCGGCGGAGGGGGCTGGAATGAGCGAGTTGAAGCAGTGGAACGAGTTGTACGGAGAAGGCGGCTCAAGAAAGCAGCAGCACTTGACTTACTTTCTCTGA 2457 0.4477 MEQKSILLSAIGVGVGVGVGLGLASGQGVGIWGATTYSSNAITAEKIEQEMLRQVVDGRESTQTRVLLTSAAYVHLKHAEVSKYTRNLAPASQTILLSGPAELYQQMLAKALAHYFEAKLLLLDLTDFSLKIQSRYGFGNQESSFKRSTSESTLERLSDLFGSFSIFQQREEPKGRIHRQSSGADLQSMGTEASCNPPKLRRNASSSSNISTLGLQSNHTNPAPLKRTTSWSFDEKLLIQSLYKVLVFVSKTYPIVLYLRDVDKLIYRSQRIYNLFQKMLKKLSGPILILGSQVLDSSNDYEEVDDRLNSLFPYTIEVKPPDDESHLVSWKSQLEEDMKKIQVQDNKNHIMEVLAANDLVCEDLDSICVADTMVLSNYIEEIIVSALSYHLMKSKDLEYRNGKLVISCNSLSHALGIFHKGKLIGKNTSKLEDQAVKSEVPKGEESVTNPEAKSEDAAPVKKPGAEASKEEGEKSVASSKAAEVPPDNEFEKRIRPEVIPADEIDVKFSDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLAKEKVDDELDFKQLATMTEGYTGSDIKNLCTTAAYRPVRELIQQERLKTLEQKQKAVTTREGKEAREEKQERVISLRALNMQDLKEAKAQVAASFAAEGAGMSELKQWNELYGEGGSRKQQHLTYFL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03100 818 ProSitePatterns AAA-protein family signature. 649 668 IPR003960 GO:0005524|GO:0016887
Aip03g03100 818 Pfam ATPase family associated with various cellular activities (AAA) 546 676 IPR003959 GO:0005524|GO:0016887
Aip03g03100 818 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 818 - -
Aip03g03100 818 MobiDBLite consensus disorder prediction 434 477 - -
Aip03g03100 818 MobiDBLite consensus disorder prediction 177 221 - -
Aip03g03100 818 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 818 - -
Aip03g03100 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 745 IPR027417 -
Aip03g03100 818 MobiDBLite consensus disorder prediction 181 221 - -
Aip03g03100 818 SMART AAA_5 542 679 IPR003593 -
Aip03g03100 818 Gene3D - 505 761 IPR027417 -
Aip03g03100 818 MobiDBLite consensus disorder prediction 434 493 - -
Aip03g03100 818 CDD AAA 544 677 - -
Aip03g03100 818 Pfam AAA+ lid domain 700 740 IPR041569 -
Aip03g03100 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 340 IPR027417 -
Aip03g03100 818 Gene3D - 678 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03100 Aip-Chr3 98108149 98112754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03100 506 765 Calmodulin-binding Proteins AT3G56690 36.567 1.91e-43 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03100 - - gmx:100807464 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03100 03 98108149 98112754 Aip03g03100 03 98108149 98112754 ECH