Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03092 ATGGATGTTGATTCGGAACCACTCAATTCAGAAGAGAACGTTAAAGATTGCTTGATGACCGGTGTGGAAGAGAATGTAAATTGCACTTGTGATTGCGGTGGCAGCAGTAGCAAGTATGTTGTTGTGACGGCCGATGATATTATAAATCAGACATTTGAAACATCGGATGCAGCTTATCACTTGTATGTGCGTTATGCAAGGTGTGTCGGGTTCGGAGTTTGCAAGGGTGATACAGCGCGTGGAAAAGATGGAACACAACGTAGAAGGCGATTTTTTTGCAACAAGGAAGGAAAGAGAGCCGATAAATACATCTCTAATTTGAACAGGAAGAGGGAGCATAAAGCGCTGACTCGTACGGGTTGTGAAGCCATGCTTGCGGTGTACTTTGACACCAAAACTTCAGCTTGGAGAGTTAAAAAATTAGTTAAGAAGCACAACCACGATCTTGTCCCCCAATGCTTGGCACACCTAATTCCAAACCACCGTGGGATGAACGAGGCTTAA 504 0.4425 MDVDSEPLNSEENVKDCLMTGVEENVNCTCDCGGSSSKYVVVTADDIINQTFETSDAAYHLYVRYARCVGFGVCKGDTARGKDGTQRRRRFFCNKEGKRADKYISNLNRKREHKALTRTGCEAMLAVYFDTKTSAWRVKKLVKKHNHDLVPQCLAHLIPNHRGMNEA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03092 167 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 164 - -
Aip03g03092 167 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 6 164 - -
Aip03g03092 167 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03092 Aip-Chr3 96817932 96818435 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g03092 FAR1 8.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03092 - - aip:107627763 337.806