Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03089 ATGTGGAGAGAAGCTTTCATGAAGGCATATAAGGCCATGGACAAAGAGCTGAGGTCTCATCCGAATCTGGATTGTTTCTGTAGTGGGAGCACAGCTGTAACCATAGTGAAGCAGAAAATAGGGAATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGGGAAGCTTAAAGAATCAAAAGGTGCAAGGGCAAGGTATTTGCCTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGAATTTTCTCACCGGCTTCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCGGATGGACATAGAAGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTATCCACGGCACCAACTAGAGCATCAGCAGCAAGGGTTCTGGTGGATTCTGCGGCCCGAGAGTGGAAAAGCAAAAGCAAGCCTCATAGAATATTTTTTGAGCTTCAACAACTTATAGAAGGCTGTAATGTTGCATTCTTGCTGTATTCAATCCTCGTCATTGGGAGACTCCTTGCTGCATTCTAA 534 0.4532 MWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQKIGNSRAIMGSKDSNDSMVGKLKESKGARARYLPCKMNQKFQGCEFSHRLLTDKDEFIVLASDGHRRDVLSNEEVVEIVSTAPTRASAARVLVDSAAREWKSKSKPHRIFFELQQLIEGCNVAFLLYSILVIGRLLAAF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03089 177 PANTHER ALPHABET, ISOFORM E-RELATED 1 57 - -
Aip03g03089 177 Gene3D - 1 71 IPR036457 -
Aip03g03089 177 Gene3D - 75 158 IPR036457 -
Aip03g03089 177 PANTHER ALPHABET, ISOFORM E-RELATED 83 142 - -
Aip03g03089 177 SUPERFAMILY PP2C-like 2 136 IPR036457 -
Aip03g03089 177 Pfam Protein phosphatase 2C 86 136 IPR001932 -
Aip03g03089 177 PANTHER - 83 142 - -
Aip03g03089 177 PANTHER - 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03089 Aip-Chr3 96813112 96814882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03089 1 141 PP2C-type Phosphatase Gene Family AT1G03590 50.262 5.43e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03089 - - aip:107612736 177.563