Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03088 ATGGGTTCAAATAGTACAGGATGTCCGGCAGGCATGAAAGCGACGTCGAATGGGGTGTTTCAGGGAGACAATCCGCTTGACTACGCACTCCCTCTTGCAATCTTACAAATCTGCATGGTGGTTCTTCTCACTCGCCTCCTAGCATTCCTTCTCAAGCCACTAAGGCAACCTCGCGTGATTGCAGAAATTGTGGGTGGAATATTGCTGGGTCCATCAGCTCTGGGACGCAGCACTGCCTTTCTAAACGCGGTCTTCCCATCCAAGAGCCTAACGGTCTTGGACACTTTGGCCAACATTGGCTTACTTTTCTTTATGTTCTTGATAGGACTCGAGCTCGACACAAGGTCCCTCCTTAACAAAACAGGAAAGAAAGCTCTTGCCATTGCCCTTGCAGGGATCACATTCCCCTTCGTCTTGGGAATCGGGACATCTTTCGCACTTCGAGCAACAATCTCGCAGGGAGTCGATAAAGCACCTTTCTTTGTGTTCATGGGAGTCGCACTCTCCATCACCGCCTTCCCCGTCCTGGCACGCATCTTGGCTGAGTTGAGGCTGCTTACCACTGAGGTTGGACGGATGGCCATGTCAGCAGCGGCTGTTAATGACGTGGCAGCGTGGATTCTTCTCGCCCTTGCGATTGCGCTCTCTGGCTCTAACTCTTCTCCACTTGTCTCCGTTTGGGTCCTCTTGTCCGGATGCGGCTTTGTAATCTGTTGCGCACTTGTTCTTCCTCCGATCTTCAGATGGATGTCTCGGCGCTGCTCTGAAGGTGAAGCCGTCAACGAGTCCTATGTCTGTGCCACGTTGGCAACGGTCTTGGCAGCTGGTTTTGTCACTGACACCATTGGAATCCATGCTCTGTTTGGGGCTTTTGTCGTTGGAGTTGTTCTTCCCAAGGAAGGCCCTTTTGCGGCTGCTCTTGTTGAGAAGGTTGAGGATCTTGTCTCTGGTCTCTTCCTTCCATTGTACTTTGTGTCCAGCGGACTCAAGACAAATGTAGCCACCATTCGTGGCCTCAAGTCCTGGGGGCTCCTTCTTTTGGTTATATTCAATGCTTGCTTCGGTAAGATTGTTGGTACCATTGCTGTCTCCTCCTTTTGTAGGGTACCTTTTCAAGAATCATTGGCTCTCGGCTTTCTCATGAATACTAAGGGCTTGGTAGAGCTCATCGTGCTCAACATTGGTAAAGATAGGAAGGTATTAAATGACCAAACATTTGCAATTATGGTGCTGATGGCTATCTTCACAACATTCATCACGACGCCTTTGGTAATGGCAGTTTATAAACCGGCCAAGAGAATGGCAAAAGCTGACTACAAATACAGAACAGTTAAGAGGAAAAACCCGGACACTCAACTGCGACTCATGGTGTGTTTCCACAGCACAAGGAACATCCCTTCAATGCTAAATCTGATTGAAGCCTCGCGCGGCACTGAAAAAAGGGAAGGCCTTTGCATATATGCATTGCATCTCATGGAGCTCACTGAGAGGCCTTCTGCTATATTGATGGTCCACAAAACCAGAAAGAATGGCCTACCCTTTTGGAACAAAGGCTGCCACAGCAACAGCCATTCTGATGCGAATCAAATGGTGATTGCATTTGAGGCTTTGGAGCAGCTAAGCAGAGTGTCGATTCGCCCCATGACTGCAATCTCATCCATCCCCAACATTCACGATGACATATGCGCTTGTGCTGAGAGCAAGAGGGTTGCAATGGTAATTCTGCCATTTCACAAGCACCAAAGGGTTGATGGAACATGGGAAACAACAAGAAGTGAATTCAGGTGGGTGAATAAGAGAGTTCTCGAGCATGCACCCTGTTCTGTAGGGATCTTGGTGGACCGGGGGCTTGGTGGGACCACCCACGTGGCAGCAAGTAATGTTTCATCTTCAATGACGATGCTATTCTTTGGAGGCAACGATGATCAAGAGGCGCTTACTTATGCTTTGAGAATGGCAGAGCATCCTGGTATCAACCTCACCATAGTGCACTTGATAGTAAGGTCCGAGGATGTTGGAGCCATTGTCAGTGTCGTAGATATAAACGACAACGCATCATCGTCATCATCATCAACGGACGAGATGCTGCTTTCTGAGGTCAAAGCAAAGAAGAGCTTATCCGTAAAGTTTGAAGAGAGAGTTGTGAAAAGCCTCGGTGAGATAATTGAGGTGGTTGGAGAGTACAGCAGAGCATGCAACTTGTTTGTGGTTGGTAGGGTGCCTAAAGGACACGTGGCGGTGACTTTGAACAATGTGAAATGCGAGTGTCCAGAATTGGGGCCACTCTGCAACTTGTTGACCTCTCCGGAACTGGTCTCAACTTCAGCCTCGGTTTTGGTCGTGCAACACTATCATGCTCTATGA 2364 0.4877 MGSNSTGCPAGMKATSNGVFQGDNPLDYALPLAILQICMVVLLTRLLAFLLKPLRQPRVIAEIVGGILLGPSALGRSTAFLNAVFPSKSLTVLDTLANIGLLFFMFLIGLELDTRSLLNKTGKKALAIALAGITFPFVLGIGTSFALRATISQGVDKAPFFVFMGVALSITAFPVLARILAELRLLTTEVGRMAMSAAAVNDVAAWILLALAIALSGSNSSPLVSVWVLLSGCGFVICCALVLPPIFRWMSRRCSEGEAVNESYVCATLATVLAAGFVTDTIGIHALFGAFVVGVVLPKEGPFAAALVEKVEDLVSGLFLPLYFVSSGLKTNVATIRGLKSWGLLLLVIFNACFGKIVGTIAVSSFCRVPFQESLALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPLVMAVYKPAKRMAKADYKYRTVKRKNPDTQLRLMVCFHSTRNIPSMLNLIEASRGTEKREGLCIYALHLMELTERPSAILMVHKTRKNGLPFWNKGCHSNSHSDANQMVIAFEALEQLSRVSIRPMTAISSIPNIHDDICACAESKRVAMVILPFHKHQRVDGTWETTRSEFRWVNKRVLEHAPCSVGILVDRGLGGTTHVAASNVSSSMTMLFFGGNDDQEALTYALRMAEHPGINLTIVHLIVRSEDVGAIVSVVDINDNASSSSSSTDEMLLSEVKAKKSLSVKFEERVVKSLGEIIEVVGEYSRACNLFVVGRVPKGHVAVTLNNVKCECPELGPLCNLLTSPELVSTSASVLVVQHYHAL 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03088 787 Pfam Sodium/hydrogen exchanger family 39 423 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip03g03088 787 Gene3D - 476 750 - -
Aip03g03088 787 PANTHER CATION/H + ANTIPORTER 5 785 - -
Aip03g03088 787 CDD USP_Like 638 746 - -
Aip03g03088 787 PANTHER CATION/H(+) ANTIPORTER 18 5 785 - -
Aip03g03088 787 Gene3D - 32 438 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03088 Aip-Chr3 96799763 96802355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03088 1 786 Antiporter Super Family AT4G23700 67.500 0.0 1067
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03088 - - tcc:18606628 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03088 03 96799763 96802355 Aip03g03088 03 96799763 96802355 ECH