Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03081 ATGTATCCAGAGCAAAATACTTATCACTTGGTCATCACTCCCCTCCAAAGCCCCTTCATCCTTGCACTGACCCGTGAAGAAACCCTCTCACCATACTCACCATCGCCACTGACCACCCACCATCGCGCAGAAACTCTCTCACTGCACCATCGCGAAGAAACCCTCTCACTGCAGCATCGCGAAGAAACCCGTACTCATCACCACTCACTACAAGAAAGTCACTCCTGTTCGCCCTCACCATCGTCATCTCTACGCTTCTCACCTTCGCCAACCCTATCGCGCACAACCCTCACCGTCGCCACCACTCACTCATCTTCATCACTCACCACTCACCACGCCGTCACTCATCTTCATTGTTGCTTCTCTTTGCTGCGCGCTCAGATCAGGAAGACCCTGCCTCAACTGAAAGCCTCTCATCAGTCGCTCACCATCGTCAAGAAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGGGCTGGTGATGATTTGCTTAAAGAGCTATGTAGGCTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAGGGTCACATTGAATTGGTATGA 651 0.49 MYPEQNTYHLVITPLQSPFILALTREETLSPYSPSPLTTHHRAETLSLHHREETLSLQHREETRTHHHSLQESHSCSPSPSSSLRFSPSPTLSRTTLTVATTHSSSSLTTHHAVTHLHCCFSLLRAQIRKTLPQLKASHQSLTIVKKIDEELLQEVVNMGFDRNQLVESLCNRIQNEMGLVMICLKSYVGCAGPLMDVPCVQDRVFYFPQGHIELV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03081 216 MobiDBLite consensus disorder prediction 58 90 - -
Aip03g03081 216 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 147 170 IPR015940 -
Aip03g03081 216 MobiDBLite consensus disorder prediction 72 90 - -
Aip03g03081 216 CDD UBA_SnRK1_plant 148 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03081 Aip-Chr3 96589608 96594750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03081 174 216 B3 DNA Binding Superfamily AT1G43950 46.939 3.47e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03081 K07198 - ahf:114925841 139.813