Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03080 ATGGAGTTCCTACGTATTTTGTTATCTTCCATTTGTTTGTTGGTTGTGATTGATCACTGGCAAGGAAATGCTGAACCTGTTGAGGATAAGCAAGCTTTGCTTGATTTTGTGAACAAATTCCCTCCTTCTAGACCTCTGAATTGGGATGAGACCTCCTCCATGTGTGCCAATTGGACCGGAGTCACTTGCAGTGAAGATGAGTCCCGGGTCATCGCCATTCGCCTGCCGGGGGTTGGATTCCATGGCCCAATTCCGCCGGATACTGTTAGCCGCCTCTCGGCACTGCAAACTTTGAGCCTCAGATCCAATGTCATAACTGGGCGGATACCTTCTGACTTTTCTAATTTGAAGAACTTAACTTTACTGTATCTTCAGTTCAACAATTTCTCTGGTCCTTTGCCTGATTTCTCAGTTTGGAAGAATCTTACTATTGTCAATTTGTCCAATAACCATTTCAATGGCAGCATTCCTGATTCCCTTTCCAATTTGACCGAGCTTGCTGGTTTGAACCTTGCAAACAACTCTCTTTCTGGCGAAATTCCCAATCTCCAGTTGCCAAGACTGCAGCTGCTGAATCTGTCTAACAACAATTTGCATGGGAGTGTGCCTAAATCCCTCCAGAGGTTTCCTGATTCGTCCTTTTTTGGAAATAATATTTCTCTTGGGAGCTCTGCTGTTGTTCCGCCAGTGCCTCCTCCGGTTTATGGGCCTTCTTCAAGGTCTAAGAAGCACGGAAGGCTCAGCGAAACAGCGCTGCTGGGAATTACTATTGCCTGTGGTGTTCTAGGCCTTGTGGCATTTGTTTTCTTGATCTTTGTATGCTGCTCAAGAAGGAGGGGTGAAGATGATGATGCCTTCAGTGGGAAGTTGCACAAGGGTGACATGTCTCCCGAGAAAGCTGTATCGAGGAACCAGGATGCGAATAATAAGCTGTCTTTCTTTGAGGGGTGTAATTATGCCTTTGATTTGGAGGATTTACTCAGGGCTTCTGCTGAGGTACTGGGAAAGGGAACGTTTGGTACTGCATACAAGGCAATACTGGAAGATGCAACCACGGTTGTTGTGAAGAGGTTAAAGGAGGTAGCAGTTGGAAAGAAGGATTTTGAGCAACACATGGAAATAGTAGGAAACCTTAAACATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAATTAATGGTATATGATTACTATAGCCAGGGTAGTGTCTCGTCAATGTTACACGCCCTAGGTGCTGCCAGAGGCATTGCTCGTATCCATGTTGAGAATGGAGGTAAACTCGTGCATGGCAACATCAAATCCTCAAATATCTTCCTCAATACTAAACAGTATGGTTGTGTATCCGACCTTGGTCTCGCATCCATAATGAGCTCACTTGCCTTACCCATCTCACGAGCTGCTGGTTACCGAGCACCTGAAGTTACGGACACCAGGAAAGCGGCACAACCTTCAGATGTTTACAGCTTTGGCGTGGTGTTACTTGAGCTTCTGACAGGGAAATCTCCTATTCACACAACTGGTGGGGATGAGATTATCCACCTGGTGAGATGGGTTCATTCGGTTGTGCGAGAGGAGTGGACAGCCGAGGTGTTTGACTTAGAGCTGATGAGGTATCCAAATATAGAGGAAGAGATGGTGGAAATGCTACAGATAGCAATGTCATGCGTGGTAAGGATGCCCGACCAGAGACCAAAGATGTCTGAAGTTGTGAAGATGATAGAAAATGTGAGGCAAATTGATGCAGAGACTCGGCCGTCTTCCGACAACCAAGCAGAACAGAAATTACCACAACATGACATCGATAATTCCCCTTCTTCCTCTCCCTCACCCTTGCCAAAAGGAAGTGAATGA 1866 0.4566 MEFLRILLSSICLLVVIDHWQGNAEPVEDKQALLDFVNKFPPSRPLNWDETSSMCANWTGVTCSEDESRVIAIRLPGVGFHGPIPPDTVSRLSALQTLSLRSNVITGRIPSDFSNLKNLTLLYLQFNNFSGPLPDFSVWKNLTIVNLSNNHFNGSIPDSLSNLTELAGLNLANNSLSGEIPNLQLPRLQLLNLSNNNLHGSVPKSLQRFPDSSFFGNNISLGSSAVVPPVPPPVYGPSSRSKKHGRLSETALLGITIACGVLGLVAFVFLIFVCCSRRRGEDDDAFSGKLHKGDMSPEKAVSRNQDANNKLSFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGNLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSMLHALGAARGIARIHVENGGKLVHGNIKSSNIFLNTKQYGCVSDLGLASIMSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDAETRPSSDNQAEQKLPQHDIDNSPSSSPSPLPKGSE 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03080 621 PANTHER PROTEIN, PUTATIVE-RELATED 23 592 - -
Aip03g03080 621 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Aip03g03080 621 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Aip03g03080 621 SUPERFAMILY L domain-like 39 209 - -
Aip03g03080 621 PANTHER OS05G0588300 PROTEIN 23 592 - -
Aip03g03080 621 Gene3D Transferase(Phosphotransferase) domain 1 403 606 - -
Aip03g03080 621 SUPERFAMILY Protein kinase-like (PK-like) 332 590 IPR011009 -
Aip03g03080 621 Gene3D Phosphorylase Kinase; domain 1 294 402 - -
Aip03g03080 621 Gene3D Ribonuclease Inhibitor 138 226 IPR032675 -
Aip03g03080 621 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Aip03g03080 621 Pfam Leucine rich repeat 84 129 IPR001611 GO:0005515
Aip03g03080 621 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Aip03g03080 621 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Aip03g03080 621 Pfam Protein kinase domain 331 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03080 621 MobiDBLite consensus disorder prediction 585 621 - -
Aip03g03080 621 MobiDBLite consensus disorder prediction 584 621 - -
Aip03g03080 621 ProSiteProfiles Protein kinase domain profile. 328 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03080 Aip-Chr3 96424652 96428512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03080 1 616 Receptor kinase-like Gene Family AT4G23740 63.199 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip03g03080 Pkinase 5.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03080 - - adu:107479781 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03080 03 96424652 96428512 Aip03g03080 03 96424652 96428512 ECH