Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03079 ATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAACGTAGCAATGGCATGATAATACAGTATGATGATAATGCCACGGTTGTCATTGATCAAGAGGAAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGGACACCATCGCCGACATAATAACCTCTATACGAAATGCTGACATGAATGGAAGAGGAACAGTTCTAATACCATCTACTAACATTACTGAAAATATTGCTAAAATGCTTTTACGAAAGGGTTTTATTGAAAACGTGAGAAAACATAGGGAAGAATTAAATTTCTACCCTATCAACTTTCGATGTTGGACCTTGGGTTGGGCTGATCGGTCCGCCGTCGGTGTGCACCGGTCGGCGCGTCCCTTCTGCCAGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCTGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATCATAGGATTCCGATCCTATTGTGTTGGCCTTCGGGATCGGACATTTGCCAACGATGTTTTCATTAATCAAGAACGAAAGTTGGGAGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAAGGATCAGCGGATGTTACTTTTAGGACTCCGCTGGCACCTTATGATAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGTACCACCAGGAGTGGAGCTTGCGGCTTAA 858 0.4429 MSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNATVVIDQEENPKGTRIFGAIARELRQLNFTKIVSLAPEDTIADIITSIRNADMNGRGTVLIPSTNITENIAKMLLRKGFIENVRKHREELNFYPINFRCWTLGWADRSAVGVHRSARPFCQRCAPGLNWPGRASGAVTLKKLECSKQAYALYTLAWDNIIGFRSYCVGLRDRTFANDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPLAPYDKSKSLGSGGSMVARLKLKGIDGRVPPGVELAA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03079 285 Pfam Ribosomal protein S8 72 120 IPR000630 GO:0003735|GO:0005840|GO:0006412
Aip03g03079 285 Gene3D Ribosomal protein L14 1 71 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aip03g03079 285 PANTHER INTRON-ENCODED HOMING ENDONUCLEASE, PUTATIVE-RELATED 134 285 - -
Aip03g03079 285 ProSitePatterns Ribosomal protein L14 signature. 11 37 IPR019972 -
Aip03g03079 285 SUPERFAMILY Ribosomal protein L14 3 71 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aip03g03079 285 SMART Ribosomal_L14_2 1 73 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip03g03079 285 Gene3D - 72 132 - -
Aip03g03079 285 Pfam Ribosomal protein L14p/L23e 4 71 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip03g03079 285 SUPERFAMILY Ribosomal protein S8 72 133 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03079 Aip-Chr3 96313834 96315474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03079 5 69 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.923 3.35e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03079 - - adu:110277264 234.958