Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03077 ATGGCGGTGCCTTTTAGATGCCCACATGTTGAACCAGCAGAAAAGTACATTTCCTTGATTCCTACATTCAATGAGGAGCATAGGCTTCCCGGAGCACTTGAAGAAACAATGAAAATAGATTATCAATTTGTGAGGGAGGACCAAAATATGGGTGAGAATGATGACAATGATTCCTCAAATATGCGCTTCTTTGTCTTCGTCGTCCTCTCCGGCAAGGCTCCACGCAGTAACAGGCCAGCAGCAACTCAAATTTCAGGATCCCCAACCGAGAAGGCAATTCTTTCTTGGGCCGTGAAGGCAGATAATGGTCTTTCTATGAGCATCCAAGAAACTGAAGTTGCAAAAGAAAGCTATGATATTATAATTCTTGATGATAACTTGGCATCAGTAGTAAAGGTAACTAACCCAAACCACATGCATGATCATCTGTTTATAATTAATTAA 444 0.4122 MAVPFRCPHVEPAEKYISLIPTFNEEHRLPGALEETMKIDYQFVREDQNMGENDDNDSSNMRFFVFVVLSGKAPRSNRPAATQISGSPTEKAILSWAVKADNGLSMSIQETEVAKESYDIIILDDNLASVVKVTNPNHMHDHLFIIN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03077 147 PANTHER CALCIUM-TRANSPORTING ATPASE 99 133 - -
Aip03g03077 147 Gene3D - 99 132 IPR023214 -
Aip03g03077 147 PANTHER CALCIUM-TRANSPORTING ATPASE 80 99 - -
Aip03g03077 147 Coils Coil 146 147 - -
Aip03g03077 147 PANTHER CATION TRANSPORTING ATPASE 99 133 - -
Aip03g03077 147 PANTHER CATION TRANSPORTING ATPASE 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03077 Aip-Chr3 96287671 96295143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03077 99 133 Primary Pumps ATPases AT3G21180 80.000 1.21e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03077 - - aip:107630728 65.0846