Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03076 ATGGCTGCAACTACTGCTTTTTCTTGTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATGAAGCACACTACTCAGCACCTCAACCGAACCAAACTCCTCATGGAACAACAACACCCAACCAAGCATCCATATCCTAAACTCATACGAATACGCGTCACCGATGCCGACGCCACCGATTCGTCCAGCGACGACGAACCACCTACCCACTCCTCCACCCGCCGCCGAGTCAAGAACTTCGTCAACGAGATCACCATTGCCTCCTCCGCTCAAGAAGCCAGCGCTACACTCGCTTCCAACAAGAGAAAGAAGAAGGCCAAGTCTACCGCTGCCATCGCAGCTCCGCCCAGCCGCCGGCGTCAGTCAAAGGCCTTCTCCGGGAAGAAGTTCCGGGGAGTGAGGCAGAGACCATGGGGCAAGTGGGCTGCTGAGATAAGAGACCCTTCTCGCCGCGTTAGGTTGTGGCTGGGAACCTACGACACCGCCGAGGAAGCCGCCATGGTGTACGACAACGCTGCCATTCAGCTTCGTGGCGCCGACGCTCTCACGAACTTCATCATTCCGCCGGCGCAGTGCTTGGCGGAGGATAACAATTCCAGCGAAGAAGAATGCACTCCAATCAGCAACAAGAAGGAGAAGAACATGTTGTCTCCCACTTCGGTTCTTCTTCGGTGTTGTTCGGAAGAAACAGAATGCGCAACCGCCACCAGTGAAGAATATGAGTATCAGAGCGAGTCAATGTTTCCGATTCCGAACGATTCACTCTTTGATTTCCAAACAGAGGAGCTTTTCAGCGATGATTTTTCAAGTGTGTTTTTGAGCTCGATTGACGAGACTCTTTTGGATTTCGGTTTCAAGAGTAGTAGTCCTTGGTACATAGATTATGATGGCACTTTCCAAGAGATTGCGGATTTCTTTGTCTCCGATCCTCTTGTGGCTCTCTGA 960 0.5125 MAATTAFSCSASSSSSSSSSSSSSSMKHTTQHLNRTKLLMEQQHPTKHPYPKLIRIRVTDADATDSSSDDEPPTHSSTRRRVKNFVNEITIASSAQEASATLASNKRKKKAKSTAAIAAPPSRRRQSKAFSGKKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAAMVYDNAAIQLRGADALTNFIIPPAQCLAEDNNSSEEECTPISNKKEKNMLSPTSVLLRCCSEETECATATSEEYEYQSESMFPIPNDSLFDFQTEELFSDDFSSVFLSSIDETLLDFGFKSSSPWYIDYDGTFQEIADFFVSDPLVAL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03076 319 MobiDBLite consensus disorder prediction 1 40 - -
Aip03g03076 319 MobiDBLite consensus disorder prediction 53 82 - -
Aip03g03076 319 ProSiteProfiles AP2/ERF domain profile. 134 191 IPR001471 GO:0003700|GO:0006355
Aip03g03076 319 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 29 315 - -
Aip03g03076 319 Gene3D AP2/ERF domain 133 192 IPR036955 GO:0003700|GO:0006355
Aip03g03076 319 MobiDBLite consensus disorder prediction 100 134 - -
Aip03g03076 319 MobiDBLite consensus disorder prediction 1 82 - -
Aip03g03076 319 Pfam AP2 domain 134 183 IPR001471 GO:0003700|GO:0006355
Aip03g03076 319 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 29 315 - -
Aip03g03076 319 PRINTS Ethylene responsive element binding protein signature 135 146 IPR001471 GO:0003700|GO:0006355
Aip03g03076 319 PRINTS Ethylene responsive element binding protein signature 157 173 IPR001471 GO:0003700|GO:0006355
Aip03g03076 319 CDD AP2 133 190 IPR001471 GO:0003700|GO:0006355
Aip03g03076 319 SMART rav1_2 134 197 IPR001471 GO:0003700|GO:0006355
Aip03g03076 319 SUPERFAMILY DNA-binding domain 134 191 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03076 Aip-Chr3 96281752 96283199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03076 26 319 AP2-EREBP Transcription Factor Family AT4G23750 39.067 1.77e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip03g03076 AP2 3.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03076 - - ahf:112732493 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03076 03 96281752 96283199 Aip03g03076 03 96281752 96283199 ECH
Aip05g01119 05 16112434 16113905 Aip03g03076 03 96281752 96283199 PCT