Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03054 ATGGCCAAATGGGTAGATCAAGTGAGAGTGAGCTTTGAGAGTGGCCTTGAAGGACCACATGAAGATGGTTACAACTGGAGAAAATATGGACAGAAAGATATCCTTGGTGCCAAATATCCCAGAAGTTATTATAGGTGCACCTTCCGGAACACTCAGGGGTGCTGGGCCACGAAGCAAGTACAGAGATCAGACGAAGATCCTACCATATTTGACATAACTTACAAAGGAAGGCATACCTGTTCTCAGGGAAACAAGGCTGTTCCGCAACCGAAATCGCCAGACAAACATGAGAAACTGCAATGTCATAGTAACGAAATTCAGCATAGACAAACATCAGAAGAAAGCCTGACAACTTTCGGGACCATTATGACAGTTAAAAGAGATATGGTGGGAAATGGAGAGATGGAATATCCTTTCACTTTCCCTTCAACTTCATTTGGAAGCATGGCACAAGAAAGCTACAGCTTGATTCCTTCAACCCTGGAGAACGAATCCTTCCTGAGCAGCCATTTCCAAACTCACTTATTATATCCAAACATGCAAGAATTTAAATACCTGCCATCTACGTCTTTCCAGATGAATGAGCTTGATGGGATCTATAATAGGCCGCTTTCAGAATCAGATATTACTGAGATCATTTCCACCAACACATCCACCACCAATTCTCCAGTTCCGGAGTTCAATTTCTCACTTGATCCAGTGGAAATTGATCCAAATTTCCCTCCCAATACCCTGGATTTTTCTCCTAGAGCCCTTATCAACAAGAACATCTAG 774 0.4264 MAKWVDQVRVSFESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYKGRHTCSQGNKAVPQPKSPDKHEKLQCHSNEIQHRQTSEESLTTFGTIMTVKRDMVGNGEMEYPFTFPSTSFGSMAQESYSLIPSTLENESFLSSHFQTHLLYPNMQEFKYLPSTSFQMNELDGIYNRPLSESDITEIISTNTSTTNSPVPEFNFSLDPVEIDPNFPPNTLDFSPRALINKNI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03054 257 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 244 IPR044810 GO:0003700
Aip03g03054 257 Pfam WRKY DNA -binding domain 21 80 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g03054 257 SUPERFAMILY WRKY DNA-binding domain 19 82 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g03054 257 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 244 - -
Aip03g03054 257 SMART WRKY_cls 20 82 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip03g03054 257 Gene3D WRKY domain 6 83 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip03g03054 257 ProSiteProfiles WRKY domain profile. 15 78 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03054 Aip-Chr3 93850147 93852014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03054 1 241 WRKY Transcription Factor Family AT4G11070 40.984 1.54e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip03g03054 WRKY 4.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03054 - - adu:107480050 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03054 03 93850147 93852014 Aip03g03054 03 93850147 93852014 ECH
Aip03g03054 03 93850147 93852014 Aip07g02868 07 114587019 114588502 ECH
Aip03g03054 03 93850147 93852014 Aip02g00310 02 4135821 4139951 ECH
Aip05g01135 05 16289017 16290276 Aip03g03054 03 93850147 93852014 PCT