Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03017 ATGGATGAGATGACAGAGTCGAAGATTCGGAAGCAGGCTTCCACCCATCTCGGCCTCGACCTCTCCCAGCCGCCCCTCAAAGCCTTCGTCAAACAGGTCGTTCAAGCATTCCTCGACGAGAAGCAGCGCCAACCTGAACCTGAAGAAGATCACAACAAGCCGGAGTACGATGACGACGGCGATCTCATCATCTGCAAGCTCTCTGAGAGGAGAAGGGTCACCGTTCAGGACTTCCGAGGCAAAACTTTGGTCTCCATTCGCGAGTATTATCGAAAGGACGGCAAGGAACTCCCTACCTCTAAAGGAATAAGTTTGACAGAGGAGCAATGGTCAGCCTTCAAGAAAAATGTGCCTGCTATAGAAAAGGCCATTAAGAAAATGCAGTCCGGCAACATATAA 399 0.5038 MDEMTESKIRKQASTHLGLDLSQPPLKAFVKQVVQAFLDEKQRQPEPEEDHNKPEYDDDGDLIICKLSERRRVTVQDFRGKTLVSIREYYRKDGKELPTSKGISLTEEQWSAFKKNVPAIEKAIKKMQSGNI 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03017 132 MobiDBLite consensus disorder prediction 41 59 - -
Aip03g03017 132 Gene3D Transcriptional Coactivator Pc4; Chain A 54 130 IPR009044 GO:0003677|GO:0006355
Aip03g03017 132 MobiDBLite consensus disorder prediction 39 59 - -
Aip03g03017 132 SUPERFAMILY ssDNA-binding transcriptional regulator domain 64 127 IPR009044 GO:0003677|GO:0006355
Aip03g03017 132 PIRSF RNA_polymII_KELP 1 131 IPR017415 -
Aip03g03017 132 Pfam DEK C terminal domain 1 38 IPR014876 -
Aip03g03017 132 Pfam Transcriptional Coactivator p15 (PC4) 65 116 IPR003173 GO:0003677|GO:0006355
Aip03g03017 132 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 1 129 IPR045125 GO:0003713|GO:0060261
Aip03g03017 132 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03017 Aip-Chr3 90243498 90244845 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Aip03g03017 PC4 5.4e-24 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03017 K25815 - gmx:100499671 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03017 03 90243498 90244845 Aip03g03017 03 90243498 90244845 ECH