Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02968 ATGCTGCCACTGTTATGCTCGACGGCGAGGCCAAGAGATACAGTCAACAGTATGGCAAGTCAATTTTTTGACAAGTTTCACGTGTTGTCGGATTTTGATGAAGGTAAACGTAGCTGTAGAAGAAAGTTAGAGCGCCATAACAATAGGAGGCAAAGAAAGCCAGCAGATTCAAGAGCTGAAGCTTCTCATGAACCTCTACCTGTTGCACAAAATGAGGATTCAAATAATGATGGGGAAACAGGAAAAGGTTTAGATTCTTCAAATTTGAGTTGTGAAATAAATGAAAAAGAAGCGTCACTGGATCTTGAAGATGAACCAGTTGCCAATCTGAACTCAGCTCCTGATATGCAGAATATTACAAATGACAGTGTTATGACTTTTCTTACTTCTGGGGAAACACAAGTGAATAGTGGAAAAGATGCTTCCAACCTCTCTAACTCTCCTTCATATTGTGACAATAAGAGTGCTTATTCATCTTTGTGCCAAACAGGTCGGATTTCTTTCAAGCTTTATGATTGGAACCCTGCAGAATTTCCTAGAAGGCTACGCCACCAAATATTCCAATGGTTGGCGAGTATGCCTGTTGAGCTTGAGGGATATATCCGCCCAAGGTGTACCATCCTGACAATTTTTCTTGCCATGCCAAAGAATATGTGGATATATGAAGACCCTATGTACTATGTGCGCGATCTTGTTGCTCCTGGAAAGTTCCTATCTGCTAGAGGCAATGCACTAATTTATCTGAATGATATGTTCTTCCGCGTTATGAAAGGCACCAAGGCTTCACTATGTTCATCCCACATACTTTGA 810 0.4111 MLPLLCSTARPRDTVNSMASQFFDKFHVLSDFDEGKRSCRRKLERHNNRRQRKPADSRAEASHEPLPVAQNEDSNNDGETGKGLDSSNLSCEINEKEASLDLEDEPVANLNSAPDMQNITNDSVMTFLTSGETQVNSGKDASNLSNSPSYCDNKSAYSSLCQTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPVELEGYIRPRCTILTIFLAMPKNMWIYEDPMYYVRDLVAPGKFLSARGNALIYLNDMFFRVMKGTKASLCSSHIL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02968 269 MobiDBLite consensus disorder prediction 42 89 - -
Aip03g02968 269 MobiDBLite consensus disorder prediction 68 89 - -
Aip03g02968 269 SUPERFAMILY SBT domain 21 56 IPR036893 GO:0003677|GO:0005634
Aip03g02968 269 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 21 260 - -
Aip03g02968 269 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 21 260 IPR044817 GO:0003677
Aip03g02968 269 ProSiteProfiles Zinc finger SBP-type profile. 1 53 IPR004333 GO:0003677
Aip03g02968 269 Pfam SBP domain 24 52 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02968 Aip-Chr3 85507061 85509472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02968 4 258 SBP-box Gene Family AT5G18830 53.462 7.80e-85 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aip03g02968 SBP 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02968 - - aip:107633362 478.404