Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02966 ATGGCATTCACTGTTTGTAGCTCTTATTGCATCACAATATCCATTGTTCTCGTAGTGTGCGGTGTTGTTGTTGTTCCCTCTCACGGAGCCACAGAATCGGAACTGCTCCTCGCCGTGAAGGATAAATTACAGAACACCAAAGAGTTATCTTCATGGACACCATCTACGACTCCGTGTTCAGGTAGAAAAGCAAACTGGAAAGGTGTTCTTTGCAATAATGGGGTAGTAACCGGGCTGCAGCTTGAGGGTATGGGGCTCAAGGGTGTCATTGATGTCGATTCTCTCAAGGGTTTACCAAATCTTAGAACCATAAGTTTCATGAATAATGAACTTGAGGGTCCAATGCCACAAATCAACAAGCTAAACGGTTTGAGGTCGGTATACCTTTCAAACAATAAGTTTTCTGGTGTTCTTCCGGACAACGCCTTCCAAGGCATGGTATGGTTGAAGAAAATCTATTTGTCAAACAATAAGCTTACGGGTCCTATTCCGGAAGGTTCTCTGACCAAATTGCCAAAGCTTATGGAGTTGAAGTTGGATGGCAATCAATTTACTGGGCCTGTTCCCAACTTGCCGCAGACTTCATTGACCTCAGTTAACTTCGCAAACAACAAGTTGCAAGGCCCAATTCCAGATTCCATGTCCAAGATGCCCTCTGCTTCCTTTTCTGGTAATGAAGAGTTATGTGGACCGCCTATGGGAGAATGTAAGAAGCAGAACCAAGACCAGAATCAGAATCAGAACCAGAACCAGAACAACGACGACAAGAGGAAGCACACAACCATGAGCATTGTTGTGGTTGTCGTAGCTGTGGTGGTGGCATTGATAGTGATTGCAGTAGTAATGTTCATCCTTTTTTACCGTAGGAAACAAGCGAAAAAAAGAGAAATAGAATCATCGATGGAGAGTCAAGAAATAGGCGCACCGCAACTGAGGAAAGGGAAATCAAATCAATTTGGGAATGAGATCAGAAGCAGGTCAATTAGATCGGTAAGCTCCAACCACAGCAGAAGAGGAGGGGATCACATGAAGTTGTCGTTCATAAGGGAAGACGGAGAGAAATTCGAGCTACACGATTTGCTGAGAGCTTCGGCTGAGATCATGGGAAGTGGATGTTTCAGTTCTTCATACAAGGCTTCTCTACCCAAAGGGCAAATGATAGTGGTGAAGAGGTACAAGCAGATGAACAATGTAGGAAGGGACGAGTTCCATGAACACATGAGAAGGATTGGAAGGTTGAATCACCCAAGTCTGCTTCCTCTTGTGGCTTACTACTACAGAAAGGAGGAGAAGCTCTTGGTTACTGACTTAGTTAAGAATGGAAGTTTGGCTGTTCGCCTTCATGGATACCAAAGTCTTGGGCTAGAAAGTCTTGATTGGCCAGCGAGGTTGAAGATTGTGAAAGGAATAACCAAAGGTCTTGAATATCTATTCAAGGACTTGCCAAGCCTTATAGCACCACATGGAAACCTTAAATCGTGCAATATTCTTCTAACAGAATCTCTTGAGCCACTCCTCTGTGACTACGGATTGATCCCACTTATAAACCAGGAACTCGCCAAGGACATCATGGTTGTGTACAAGTCCCCAGAGTACTTGAACAATGGAAGAATCACAAAGAAGACTGACGTGTGGTGCCTTGGAATCTTGATCCTGGAGATTCTCACTGGCAAGTTCCCTGAGAATTTCTTGCAGCAGGGTAAAGGGAGCGAGGTGAGTCTCGCAAATTGGGTTCGTTCCATTGCCCCAGAAGAATGGACCAAGGAGGTCTTTGATAAGGAGTTAATGGGAGCGATCAAGACCAGTGAGGGAGAGATGGTGAAGCTGTTGAATATTGCGATGGCGTGTTGTGAAGAGGATTTGGAGAAAAGGTGGGACTTGAAAGAAGCAGTTGAGAAGATTGAAGAGATTAGAGAGAAGGATCAAGAAGATGATTTTTTCACTGTTGCTGATGATGCAGATGTAGGGTCTACAAGGACACTGTCTGGTGAAATCAATTTCTAG 2004 0.4436 MAFTVCSSYCITISIVLVVCGVVVVPSHGATESELLLAVKDKLQNTKELSSWTPSTTPCSGRKANWKGVLCNNGVVTGLQLEGMGLKGVIDVDSLKGLPNLRTISFMNNELEGPMPQINKLNGLRSVYLSNNKFSGVLPDNAFQGMVWLKKIYLSNNKLTGPIPEGSLTKLPKLMELKLDGNQFTGPVPNLPQTSLTSVNFANNKLQGPIPDSMSKMPSASFSGNEELCGPPMGECKKQNQDQNQNQNQNQNNDDKRKHTTMSIVVVVVAVVVALIVIAVVMFILFYRRKQAKKREIESSMESQEIGAPQLRKGKSNQFGNEIRSRSIRSVSSNHSRRGGDHMKLSFIREDGEKFELHDLLRASAEIMGSGCFSSSYKASLPKGQMIVVKRYKQMNNVGRDEFHEHMRRIGRLNHPSLLPLVAYYYRKEEKLLVTDLVKNGSLAVRLHGYQSLGLESLDWPARLKIVKGITKGLEYLFKDLPSLIAPHGNLKSCNILLTESLEPLLCDYGLIPLINQELAKDIMVVYKSPEYLNNGRITKKTDVWCLGILILEILTGKFPENFLQQGKGSEVSLANWVRSIAPEEWTKEVFDKELMGAIKTSEGEMVKLLNIAMACCEEDLEKRWDLKEAVEKIEEIREKDQEDDFFTVADDADVGSTRTLSGEINF 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02966 667 MobiDBLite consensus disorder prediction 207 222 - -
Aip03g02966 667 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Aip03g02966 667 MobiDBLite consensus disorder prediction 207 256 - -
Aip03g02966 667 Gene3D Ribonuclease Inhibitor 193 240 IPR032675 -
Aip03g02966 667 MobiDBLite consensus disorder prediction 296 343 - -
Aip03g02966 667 SUPERFAMILY L domain-like 42 231 - -
Aip03g02966 667 MobiDBLite consensus disorder prediction 303 334 - -
Aip03g02966 667 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Aip03g02966 667 ProSiteProfiles Protein kinase domain profile. 362 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02966 667 MobiDBLite consensus disorder prediction 237 251 - -
Aip03g02966 667 SUPERFAMILY Protein kinase-like (PK-like) 366 638 IPR011009 -
Aip03g02966 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 649 - -
Aip03g02966 667 Pfam Leucine rich repeat 123 184 IPR001611 GO:0005515
Aip03g02966 667 Gene3D Transferase(Phosphotransferase) domain 1 438 657 - -
Aip03g02966 667 PANTHER LRR RECEPTOR-LIKE KINASE 9 649 - -
Aip03g02966 667 Gene3D Phosphorylase Kinase; domain 1 327 436 - -
Aip03g02966 667 Pfam Protein tyrosine and serine/threonine kinase 366 633 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02966 Aip-Chr3 85334781 85337332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02966 1 667 Receptor kinase-like Gene Family AT5G35390 49.486 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip03g02966 PK_Tyr_Ser-Thr 2.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02966 - - aip:107633360 1268.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02966 03 85334781 85337332 Aip03g02966 03 85334781 85337332 ECH
Aip03g02966 03 85334781 85337332 Aip05g03398 05 140301872 140306097 PCT