Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02963 ATGGGGATTTGCTTCAGCATTGAAGACCAAAAGCATCACTCCATCTCCGATTCGAGTTCTAAGCCTCGGCCTCAAGGATATGAATCTGCATCGTCGACGACTCCGCTGAGTTCGATGAATATCAAAGATCTGCGGCAGAGTGCTGGATACTGCAATGTTGATATATTCACGTACGAGGAGCTGAGGCTAGCGACAAAGTACTTCCGCCCTGACTTGATTCTTGGAGAAGGTGGCTTCGGAGTGGTGTATAAAGGTGTCATTGATGATAGTGTGAGGCCAGGCTTCAAGCCCACTCAAGTCGCCATCAAGGAGCTTAATCGTGAAGGATTTCAAGGCGATAGGGAATGGCTCGCTGAAGTTAACTACTTAGGTCAATTCAGTCACCCAAATCTTGTAAAGCTCATTGGATACTGCTGTGAGGATGAACACCGGTTATTAGTCTATGAGTACATGGCAAGTGGCAGCTTGGAGAAACATCTTTTTCGCAGAGTGGGCTCAACACTAACTTGGTCAAAAAGAATGAAGATTGCTTTACACGCTGCAAGAGGGCTTGCTTTTCTTCACGGTGCAGAGAGGCCCATCATATATCGTGATTTTAAGACATCAAATATCCTGCTAGATGCGGATTTCAACGCAAAGCTTTCAGACTTTGGTCTTGCTAAGGATGGGCCAATGGGGGACCAAACCCATGTTTCAACACGAGTGATGGGCACATATGGATATGCTGCTCCTGAGTATGTCATGACTGGGCATTTGACAGCTCGAAGTGATGTGTATGGCTTTGGGGTGGTGCTACTTGAATTGCTTATTGGTAGGAGAGCGTTAGACAAGAGTAGGCCCAGCCGAGAGCATAACTTGGTTGAGTGGGCACGGCCACTGTTGAATCATAACAAGAAACTTCTAAAAATTTTAGACCCTAAAATCGAAGGGCAATATTCAAGTAAAACCGCAATAAAGGTAGCTAATTTGGCATACCAGTGTCTTAGCCAAAACCCGAAAGGCAGACCCCTGATGAGCCAGGTAGTTGAAATTCTTGAAAATTTTCAGTCAAGTGGGGAAAATGAGGAAGAACAAATGATTCAAAATGGCAGCAGCAGCCTAACCATTTATGAGGTTCCGAAGGGCGGCAATGGCAATTCACTTGAAGGCAGGAACCAAAGTCGAAATGATGAGCTTCGTAGGAACGAACGAAGAATAGAAAAAAGCAAGAGTCAGCCTTCAAATCGTAATTTATCCGGTTCTTAA 1245 0.4506 MGICFSIEDQKHHSISDSSSKPRPQGYESASSTTPLSSMNIKDLRQSAGYCNVDIFTYEELRLATKYFRPDLILGEGGFGVVYKGVIDDSVRPGFKPTQVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAARGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSREHNLVEWARPLLNHNKKLLKILDPKIEGQYSSKTAIKVANLAYQCLSQNPKGRPLMSQVVEILENFQSSGENEEEQMIQNGSSSLTIYEVPKGGNGNSLEGRNQSRNDELRRNERRIEKSKSQPSNRNLSGS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02963 414 MobiDBLite consensus disorder prediction 368 385 - -
Aip03g02963 414 Gene3D Phosphorylase Kinase; domain 1 42 150 - -
Aip03g02963 414 MobiDBLite consensus disorder prediction 1 35 - -
Aip03g02963 414 PANTHER OS01G0588500 PROTEIN-RELATED 26 393 - -
Aip03g02963 414 CDD STKc_IRAK 74 348 - -
Aip03g02963 414 MobiDBLite consensus disorder prediction 386 404 - -
Aip03g02963 414 ProSitePatterns Protein kinases ATP-binding region signature. 74 103 IPR017441 GO:0005524
Aip03g02963 414 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED 26 393 - -
Aip03g02963 414 Pfam Protein tyrosine and serine/threonine kinase 73 345 IPR001245 GO:0004672|GO:0006468
Aip03g02963 414 SUPERFAMILY Protein kinase-like (PK-like) 49 346 IPR011009 -
Aip03g02963 414 MobiDBLite consensus disorder prediction 19 35 - -
Aip03g02963 414 Gene3D Transferase(Phosphotransferase) domain 1 151 371 - -
Aip03g02963 414 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02963 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Aip03g02963 414 MobiDBLite consensus disorder prediction 368 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02963 Aip-Chr3 85211533 85215487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02963 56 345 Glycoside Hydrolase AT3G07070 51.877 1.01e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip03g02963 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02963 - - gmx:100800465 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02963 03 85211533 85215487 Aip03g02963 03 85211533 85215487 ECH