Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02950 ATGGCAGGTGCAGGTGCCATGAAGAAGGTCGACAGGATTCGCCAAATCGTTCGCCTCAAGCAGCTCATGATGCGGTGGAGGGCCATCAGCCACCGCCGCCACCACCACCACTACGACTCCTCCTCCCTCGATTCAAAACCCTGCGCATCGTCGCCACGACGCGCTCCCTCGGGGTTCGTGTTCGTGTACGTTGGTCAAGAACGCAAGCGTTTCGTGATTCCCGCAAGATTCCTCAACCTGCCGGTGTTCGCTGGTCTCCTCAAAGAAACCGAAGAGGTTTTCGGTCTTCGATGTAGCGGCGGTTTACTCCTCCCTTGCGAAGTTGCGTTCTTCAGTAACATCGTGAAGCACCTCGAGAAAGACGAACACAAGTACGGGAAGCTTTCTTTGGAGGATTTCGTGAACATGGTTTCTGACTTGGCTTCTGATTCTTGCTGCAAAGAAGGCATTGTTGCCTTCACTCCTCTCTTGCAGAAAGCAAGGGTTTAA 489 0.5358 MAGAGAMKKVDRIRQIVRLKQLMMRWRAISHRRHHHHYDSSSLDSKPCASSPRRAPSGFVFVYVGQERKRFVIPARFLNLPVFAGLLKETEEVFGLRCSGGLLLPCEVAFFSNIVKHLEKDEHKYGKLSLEDFVNMVSDLASDSCCKEGIVAFTPLLQKARV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02950 162 Pfam Auxin responsive protein 18 117 IPR003676 GO:0009733
Aip03g02950 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 151 IPR003676 GO:0009733
Aip03g02950 162 PANTHER - 10 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02950 Aip-Chr3 84504610 84505424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02950 9 136 Calmodulin-binding Proteins AT3G43120 33.333 4.60e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02950 K14488 - gmx:100793118 191.815