Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02937 ATGATTGATCGGGCGCTCGAGAGAGAGTTCCCCGAGAATGAGCAGAATGAAGGTAATGATGCTGGCGGTTTCAACAATAGTGTTGCTGAACAGCAGGCTGTTTTGGAAACTGTTGCTAGAGTTAAGTCCAAGAAAAATGAGAGCAAAGAAGAAAAATCATTTCATATTCATGATGTTTTCCATTTGGATACTGAGAATCGTGCAGAGGATATGCCAACCTTAATTGATCGAAAGGATAATGTGTTTATCATCTCCAATCCCAAGTCAAAGTATCCTGTTCTTCAAGTAGATTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTTTCTGCAACATGTGGTGGCATTGCCTTTGCTTGTGCTGGACAACCGGTTATGACAGGATATCTGTTGGCAGGATCACTCATTGGACCTGGTGGCTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACTGTTGCTCAATTTGGTGTTATCTTTTTGCTTTTTGCATTGGGATTAGAATTTTCAACAACAAAGCTTCGAGTTGTTCGAGCGGTGGCTATTCTTGGCGGTCTACTTCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTACGCTATGTGGTGGTAAATCATCTGAAGGAATATTTGTGGGTGCATTTCTTTCTATGTCTTCGACAGCAGTGGTCTTGAAATTCTTGATGGAAAGGAATAGTGTCAATGCCCTTCATGGTCAGGTTACAATTGGAACACTGATTCTGCAGGATTGTGCTGTTGGTTTGCTCTTTGCATTGCTTCCAGTATTGGGTGGAACATCAGGTGTTCTTCAGGGAGTAATATCCATGACTAAATCGTTGGTCATCTTAATTGCTTTTTTGGCCATTTTGTCGATAGTATCTCGTACTTGTGTACCATGGTTTCTTAGGCTTATGATAAGCCTATCATCTCAGACCAATGAACTTTATCAATTGGCATCAGTGGCATTCTGCCTACTTGTGGCTTGGTGTAGTGATAAGTTGGGTTTAAGTCTTTTGACTGTTATACTGGTGATCATCATAAAGACAATTGTAGCTGCATCTGTTGTCAAGGGGTTTGGTTACAACAACAAGACTTCACTTCTTGTTGGGATGTCTTTGGCACAAATTGGGGAGTTTGCCTTTGTTCTTCTCAGTCGTGCTTCAAATCTTCATCTAGTGGAGGTGATTGCTTCATCACGAATGTTGGTTTGA 1215 0.4066 MIDRALEREFPENEQNEGNDAGGFNNSVAEQQAVLETVARVKSKKNESKEEKSFHIHDVFHLDTENRAEDMPTLIDRKDNVFIISNPKSKYPVLQVDLRLISDLVVVIVSATCGGIAFACAGQPVMTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQIFLFMCLCGITATLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVISMTKSLVILIAFLAILSIVSRTCVPWFLRLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLLTVILVIIIKTIVAASVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEVIASSRMLV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02937 404 Pfam Sodium/hydrogen exchanger family 105 338 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip03g02937 404 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 1 339 IPR045158 GO:0015386|GO:0071805|GO:1902600
Aip03g02937 404 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 341 395 IPR045158 GO:0015386|GO:0071805|GO:1902600
Aip03g02937 404 MobiDBLite consensus disorder prediction 1 15 - -
Aip03g02937 404 Gene3D - 340 404 IPR038770 -
Aip03g02937 404 Gene3D - 98 339 IPR038770 -
Aip03g02937 404 PANTHER K(+) EFFLUX ANTIPORTER 6 1 339 - -
Aip03g02937 404 PANTHER K(+) EFFLUX ANTIPORTER 6 341 395 - -
Aip03g02937 404 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02937 Aip-Chr3 83174166 83180176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02937 1 339 Antiporters AT2G19600 85.337 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02937 - - ming:122066282 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02937 03 83174166 83180176 Aip03g02937 03 83174166 83180176 ECH