Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02936 ATGGGAAGGAAGTGCTCACATTGTGGGAACGTAGGGCACAATTCAAGAACATGCACTTCTTCTTCGTTTCTTGGAATCCGTCTCTTTGGAACCCACCTTCTAGCAGATCCCTCCTCCTCCTCCTCCTCCGCGTCGATGATGACGATGAACAACAAGTGCTTTAGCATGGACTCGTTAACATTATTCCCCACTACTACTACTACTGCTAGTGGTTATCTATCAGATGGAGCTCCACCTCAAGACAAGAAGAAAGGGGTAGCATGGACGGAAGAGGAGCACAGAAGATTCCTGGTTGGGCTTGAGAAGCTGGGGAAGGGAGACTGGAGGGGCATTTCTAGAAACTTCGTAACCACCAGAACACCGACTCAAGTCGCCAGCCATGCTCAGAAGTATTTCCTCCGTCTTGCTAATACCGTAAACCACAACAAACGCCGTTCAAGTCTCTTTGACACAAACAATACTCCTACTACTACTGCTGCTGCTACTGTTGCTACATTGTCATTTCACTTTCTTGAACAACAACAAACCATCAACAACAACAATAAGCCGTTGTTATCAACAGAAACTACTTCTGAATCCTCCTCCTCCTCTTCCTCCTCCTCCTCTATGTATAATAATAGTGTGCCACCACCGGATCTGGACCTCACTCTTGCACCGCCCCCACCACCTAACTCCTCCTCATGCTTCCCCCAATTATAA 699 0.4735 MGRKCSHCGNVGHNSRTCTSSSFLGIRLFGTHLLADPSSSSSSASMMTMNNKCFSMDSLTLFPTTTTTASGYLSDGAPPQDKKKGVAWTEEEHRRFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLANTVNHNKRRSSLFDTNNTPTTTAAATVATLSFHFLEQQQTINNNNKPLLSTETTSESSSSSSSSSSMYNNSVPPPDLDLTLAPPPPPNSSSCFPQL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02936 232 MobiDBLite consensus disorder prediction 179 209 - -
Aip03g02936 232 Gene3D - 86 137 - -
Aip03g02936 232 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 83 134 IPR006447 GO:0003677
Aip03g02936 232 CDD SANT 87 132 IPR001005 -
Aip03g02936 232 MobiDBLite consensus disorder prediction 179 232 - -
Aip03g02936 232 SMART sant 84 134 IPR001005 -
Aip03g02936 232 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Aip03g02936 232 SUPERFAMILY Homeodomain-like 82 137 IPR009057 -
Aip03g02936 232 Pfam Myb-like DNA-binding domain 87 132 IPR001005 -
Aip03g02936 232 ProSiteProfiles SANT domain profile. 88 136 IPR017884 -
Aip03g02936 232 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 201 - -
Aip03g02936 232 ProSiteProfiles Myb-like domain profile. 80 132 IPR001005 -
Aip03g02936 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 136 IPR017930 -
Aip03g02936 232 MobiDBLite consensus disorder prediction 213 232 - -
Aip03g02936 232 PANTHER TRANSCRIPTION FACTOR KUA1 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02936 Aip-Chr3 83045669 83046651 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip03g02936 Myb_DNA-binding 7.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02936 - - adu:107479628 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02936 03 83045669 83046651 Aip03g02936 03 83045669 83046651 ECH